Protein–RNA interactions for Protein: Q60596

Xrcc1, DNA repair protein XRCC1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrcc1Q60596 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Xrcc1Q60596 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Xrcc1Q60596 AC126549.2-201ENSMUST00000223997 1976 ntBASIC13.39□□□□□ -0.27
Xrcc1Q60596 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Xrcc1Q60596 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Xrcc1Q60596 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Xrcc1Q60596 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Xrcc1Q60596 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Xrcc1Q60596 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Xrcc1Q60596 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Xrcc1Q60596 Gm38102-201ENSMUST00000192791 1935 ntBASIC13.39□□□□□ -0.27
Xrcc1Q60596 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Xrcc1Q60596 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC13.39□□□□□ -0.27
Xrcc1Q60596 Gm6263-201ENSMUST00000120029 1342 ntBASIC13.39□□□□□ -0.27
Xrcc1Q60596 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Xrcc1Q60596 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Xrcc1Q60596 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Xrcc1Q60596 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Xrcc1Q60596 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Xrcc1Q60596 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
Xrcc1Q60596 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Xrcc1Q60596 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Xrcc1Q60596 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Xrcc1Q60596 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Xrcc1Q60596 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Xrcc1Q60596 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Xrcc1Q60596 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Xrcc1Q60596 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Xrcc1Q60596 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Xrcc1Q60596 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Xrcc1Q60596 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Xrcc1Q60596 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Xrcc1Q60596 Gm37714-201ENSMUST00000194742 342 ntBASIC13.38□□□□□ -0.27
Xrcc1Q60596 Gm18027-201ENSMUST00000218947 619 ntBASIC13.38□□□□□ -0.27
Xrcc1Q60596 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Xrcc1Q60596 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC13.38□□□□□ -0.27
Xrcc1Q60596 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Xrcc1Q60596 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Xrcc1Q60596 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Xrcc1Q60596 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Xrcc1Q60596 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
Xrcc1Q60596 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
Xrcc1Q60596 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Xrcc1Q60596 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Xrcc1Q60596 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC13.38□□□□□ -0.27
Xrcc1Q60596 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Xrcc1Q60596 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Xrcc1Q60596 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Xrcc1Q60596 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Xrcc1Q60596 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Xrcc1Q60596 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Xrcc1Q60596 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Xrcc1Q60596 Syt7-204ENSMUST00000223586 1344 ntBASIC13.38□□□□□ -0.27
Xrcc1Q60596 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Xrcc1Q60596 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Xrcc1Q60596 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Xrcc1Q60596 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Xrcc1Q60596 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
Xrcc1Q60596 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Xrcc1Q60596 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
Xrcc1Q60596 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Xrcc1Q60596 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC13.37□□□□□ -0.27
Xrcc1Q60596 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Xrcc1Q60596 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Xrcc1Q60596 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Xrcc1Q60596 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Xrcc1Q60596 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Xrcc1Q60596 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Xrcc1Q60596 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Xrcc1Q60596 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Xrcc1Q60596 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC13.37□□□□□ -0.27
Xrcc1Q60596 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Xrcc1Q60596 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC13.37□□□□□ -0.27
Xrcc1Q60596 AC131690.1-201ENSMUST00000218406 374 ntBASIC13.37□□□□□ -0.27
Xrcc1Q60596 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC13.37□□□□□ -0.27
Xrcc1Q60596 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Xrcc1Q60596 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC13.37□□□□□ -0.27
Xrcc1Q60596 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Xrcc1Q60596 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Xrcc1Q60596 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Xrcc1Q60596 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Xrcc1Q60596 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Xrcc1Q60596 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.37□□□□□ -0.27
Xrcc1Q60596 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Xrcc1Q60596 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Xrcc1Q60596 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.37□□□□□ -0.27
Xrcc1Q60596 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Xrcc1Q60596 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Xrcc1Q60596 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Xrcc1Q60596 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Xrcc1Q60596 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Xrcc1Q60596 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Xrcc1Q60596 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Xrcc1Q60596 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Xrcc1Q60596 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Xrcc1Q60596 Nupl1-207ENSMUST00000225311 2475 ntBASIC13.36□□□□□ -0.27
Xrcc1Q60596 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Xrcc1Q60596 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Xrcc1Q60596 Gm9347-201ENSMUST00000211473 1607 ntBASIC13.36□□□□□ -0.27
Xrcc1Q60596 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms