Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Shroom1Q5SX79 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC14.9□□□□□ -0.02
Shroom1Q5SX79 AC155286.1-201ENSMUST00000218632 448 ntBASIC14.9□□□□□ -0.02
Shroom1Q5SX79 AC139580.1-202ENSMUST00000223574 928 ntBASIC14.9□□□□□ -0.02
Shroom1Q5SX79 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Shroom1Q5SX79 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Shroom1Q5SX79 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Shroom1Q5SX79 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Shroom1Q5SX79 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC14.9□□□□□ -0.02
Shroom1Q5SX79 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Shroom1Q5SX79 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Shroom1Q5SX79 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Shroom1Q5SX79 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.9□□□□□ -0.02
Shroom1Q5SX79 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Shroom1Q5SX79 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Shroom1Q5SX79 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Shroom1Q5SX79 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Shroom1Q5SX79 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Shroom1Q5SX79 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Shroom1Q5SX79 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Shroom1Q5SX79 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC14.89□□□□□ -0.03
Shroom1Q5SX79 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Shroom1Q5SX79 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Shroom1Q5SX79 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC14.89□□□□□ -0.03
Shroom1Q5SX79 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.89□□□□□ -0.03
Shroom1Q5SX79 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Shroom1Q5SX79 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Shroom1Q5SX79 Gm14451-201ENSMUST00000121581 1542 ntBASIC14.89□□□□□ -0.03
Shroom1Q5SX79 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Shroom1Q5SX79 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Shroom1Q5SX79 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Shroom1Q5SX79 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Shroom1Q5SX79 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
Shroom1Q5SX79 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Shroom1Q5SX79 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC14.89□□□□□ -0.03
Shroom1Q5SX79 Mir6392-201ENSMUST00000184924 108 ntBASIC14.89□□□□□ -0.03
Shroom1Q5SX79 Gm21470-201ENSMUST00000187680 696 ntBASIC14.89□□□□□ -0.03
Shroom1Q5SX79 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC14.89□□□□□ -0.03
Shroom1Q5SX79 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Shroom1Q5SX79 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC14.89□□□□□ -0.03
Shroom1Q5SX79 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC14.89□□□□□ -0.03
Shroom1Q5SX79 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Shroom1Q5SX79 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Shroom1Q5SX79 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.89□□□□□ -0.03
Shroom1Q5SX79 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Shroom1Q5SX79 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Shroom1Q5SX79 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.89□□□□□ -0.03
Shroom1Q5SX79 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Shroom1Q5SX79 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC14.89□□□□□ -0.03
Shroom1Q5SX79 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC14.89□□□□□ -0.03
Shroom1Q5SX79 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Shroom1Q5SX79 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Shroom1Q5SX79 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Shroom1Q5SX79 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Shroom1Q5SX79 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Shroom1Q5SX79 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Shroom1Q5SX79 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Shroom1Q5SX79 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Shroom1Q5SX79 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Shroom1Q5SX79 Gm28182-201ENSMUST00000188354 2477 ntBASIC14.88□□□□□ -0.03
Shroom1Q5SX79 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Shroom1Q5SX79 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Shroom1Q5SX79 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Shroom1Q5SX79 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
Shroom1Q5SX79 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Shroom1Q5SX79 AC159649.2-201ENSMUST00000222984 3223 ntBASIC14.88□□□□□ -0.03
Shroom1Q5SX79 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Shroom1Q5SX79 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Shroom1Q5SX79 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Shroom1Q5SX79 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Shroom1Q5SX79 Gm6283-201ENSMUST00000182369 1000 ntBASIC14.88□□□□□ -0.03
Shroom1Q5SX79 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC14.88□□□□□ -0.03
Shroom1Q5SX79 Gm45059-201ENSMUST00000205558 1077 ntBASIC14.88□□□□□ -0.03
Shroom1Q5SX79 Gm44608-201ENSMUST00000206827 855 ntBASIC14.88□□□□□ -0.03
Shroom1Q5SX79 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Shroom1Q5SX79 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Shroom1Q5SX79 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Shroom1Q5SX79 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Shroom1Q5SX79 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Shroom1Q5SX79 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Shroom1Q5SX79 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Shroom1Q5SX79 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Shroom1Q5SX79 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Shroom1Q5SX79 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Shroom1Q5SX79 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Shroom1Q5SX79 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Shroom1Q5SX79 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC14.88□□□□□ -0.03
Shroom1Q5SX79 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Shroom1Q5SX79 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Shroom1Q5SX79 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Shroom1Q5SX79 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Shroom1Q5SX79 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC14.87□□□□□ -0.03
Shroom1Q5SX79 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Shroom1Q5SX79 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Shroom1Q5SX79 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC14.87□□□□□ -0.03
Shroom1Q5SX79 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Shroom1Q5SX79 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Shroom1Q5SX79 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC14.87□□□□□ -0.03
Shroom1Q5SX79 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Shroom1Q5SX79 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms