Protein–RNA interactions for Protein: Q5F4S9

Trpm3, Transient receptor potential cation channel, subfamily M, member 3, mousemouse

Predictions only

Length 1,721 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpm3Q5F4S9 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trpm3Q5F4S9 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trpm3Q5F4S9 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trpm3Q5F4S9 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trpm3Q5F4S9 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC17.42■□□□□ 0.38
Trpm3Q5F4S9 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trpm3Q5F4S9 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trpm3Q5F4S9 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
Trpm3Q5F4S9 Gm8801-201ENSMUST00000173255 1064 ntBASIC17.42■□□□□ 0.38
Trpm3Q5F4S9 Gm27682-201ENSMUST00000183930 110 ntBASIC17.42■□□□□ 0.38
Trpm3Q5F4S9 Gm37922-201ENSMUST00000195596 455 ntBASIC17.42■□□□□ 0.38
Trpm3Q5F4S9 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trpm3Q5F4S9 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trpm3Q5F4S9 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trpm3Q5F4S9 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trpm3Q5F4S9 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trpm3Q5F4S9 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trpm3Q5F4S9 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trpm3Q5F4S9 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trpm3Q5F4S9 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trpm3Q5F4S9 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trpm3Q5F4S9 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trpm3Q5F4S9 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC17.42■□□□□ 0.38
Trpm3Q5F4S9 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trpm3Q5F4S9 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trpm3Q5F4S9 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.42■□□□□ 0.38
Trpm3Q5F4S9 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trpm3Q5F4S9 Gm16177-201ENSMUST00000120728 718 ntBASIC17.41■□□□□ 0.38
Trpm3Q5F4S9 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trpm3Q5F4S9 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trpm3Q5F4S9 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Trpm3Q5F4S9 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trpm3Q5F4S9 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trpm3Q5F4S9 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trpm3Q5F4S9 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trpm3Q5F4S9 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trpm3Q5F4S9 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trpm3Q5F4S9 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trpm3Q5F4S9 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trpm3Q5F4S9 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trpm3Q5F4S9 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Trpm3Q5F4S9 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Trpm3Q5F4S9 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trpm3Q5F4S9 Gm12329-201ENSMUST00000120829 1007 ntBASIC17.41■□□□□ 0.38
Trpm3Q5F4S9 Gm11978-201ENSMUST00000122315 466 ntBASIC17.41■□□□□ 0.38
Trpm3Q5F4S9 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trpm3Q5F4S9 Gm38002-201ENSMUST00000193255 180 ntBASIC17.41■□□□□ 0.38
Trpm3Q5F4S9 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC17.41■□□□□ 0.38
Trpm3Q5F4S9 Gm40466-201ENSMUST00000212174 422 ntBASIC17.41■□□□□ 0.38
Trpm3Q5F4S9 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC17.41■□□□□ 0.38
Trpm3Q5F4S9 CT573086.1-201ENSMUST00000227202 1074 ntBASIC17.41■□□□□ 0.38
Trpm3Q5F4S9 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trpm3Q5F4S9 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC17.41■□□□□ 0.38
Trpm3Q5F4S9 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trpm3Q5F4S9 AC096628.2-201ENSMUST00000225443 1413 ntBASIC17.41■□□□□ 0.38
Trpm3Q5F4S9 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC17.41■□□□□ 0.38
Trpm3Q5F4S9 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trpm3Q5F4S9 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trpm3Q5F4S9 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Trpm3Q5F4S9 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trpm3Q5F4S9 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trpm3Q5F4S9 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Trpm3Q5F4S9 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC17.4■□□□□ 0.38
Trpm3Q5F4S9 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
Trpm3Q5F4S9 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC17.4■□□□□ 0.38
Trpm3Q5F4S9 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC17.4■□□□□ 0.38
Trpm3Q5F4S9 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Trpm3Q5F4S9 Gm10327-201ENSMUST00000105222 1002 ntBASIC17.4■□□□□ 0.38
Trpm3Q5F4S9 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
Trpm3Q5F4S9 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC17.4■□□□□ 0.38
Trpm3Q5F4S9 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trpm3Q5F4S9 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trpm3Q5F4S9 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trpm3Q5F4S9 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC17.4■□□□□ 0.38
Trpm3Q5F4S9 Gm6013-201ENSMUST00000212264 699 ntBASIC17.4■□□□□ 0.38
Trpm3Q5F4S9 CU024892.2-201ENSMUST00000224608 832 ntBASIC17.4■□□□□ 0.38
Trpm3Q5F4S9 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Trpm3Q5F4S9 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC17.4■□□□□ 0.38
Trpm3Q5F4S9 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Trpm3Q5F4S9 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trpm3Q5F4S9 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trpm3Q5F4S9 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trpm3Q5F4S9 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC17.4■□□□□ 0.38
Trpm3Q5F4S9 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trpm3Q5F4S9 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trpm3Q5F4S9 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trpm3Q5F4S9 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trpm3Q5F4S9 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC17.39■□□□□ 0.37
Trpm3Q5F4S9 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trpm3Q5F4S9 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.39■□□□□ 0.37
Trpm3Q5F4S9 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
Trpm3Q5F4S9 Gm6447-201ENSMUST00000118905 835 ntBASIC17.39■□□□□ 0.37
Trpm3Q5F4S9 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC17.39■□□□□ 0.37
Trpm3Q5F4S9 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Trpm3Q5F4S9 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC17.39■□□□□ 0.37
Trpm3Q5F4S9 Gm43133-201ENSMUST00000197472 463 ntBASIC17.39■□□□□ 0.37
Trpm3Q5F4S9 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC17.39■□□□□ 0.37
Trpm3Q5F4S9 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trpm3Q5F4S9 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trpm3Q5F4S9 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms