Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rnf20Q5DTM8 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Rnf20Q5DTM8 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC16.69■□□□□ 0.26
Rnf20Q5DTM8 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rnf20Q5DTM8 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rnf20Q5DTM8 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rnf20Q5DTM8 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Rnf20Q5DTM8 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rnf20Q5DTM8 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rnf20Q5DTM8 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Rnf20Q5DTM8 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC16.68■□□□□ 0.26
Rnf20Q5DTM8 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC16.68■□□□□ 0.26
Rnf20Q5DTM8 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC16.68■□□□□ 0.26
Rnf20Q5DTM8 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rnf20Q5DTM8 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rnf20Q5DTM8 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rnf20Q5DTM8 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rnf20Q5DTM8 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC16.68■□□□□ 0.26
Rnf20Q5DTM8 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Rnf20Q5DTM8 Gm6916-202ENSMUST00000205523 195 ntBASIC16.68■□□□□ 0.26
Rnf20Q5DTM8 CT030704.2-201ENSMUST00000228887 494 ntBASIC16.68■□□□□ 0.26
Rnf20Q5DTM8 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Rnf20Q5DTM8 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rnf20Q5DTM8 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
Rnf20Q5DTM8 Gm43399-201ENSMUST00000202546 2374 ntBASIC16.68■□□□□ 0.26
Rnf20Q5DTM8 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rnf20Q5DTM8 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rnf20Q5DTM8 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Rnf20Q5DTM8 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rnf20Q5DTM8 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rnf20Q5DTM8 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rnf20Q5DTM8 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rnf20Q5DTM8 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rnf20Q5DTM8 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rnf20Q5DTM8 Fgf17-202ENSMUST00000227123 1336 ntBASIC16.68■□□□□ 0.26
Rnf20Q5DTM8 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rnf20Q5DTM8 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rnf20Q5DTM8 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rnf20Q5DTM8 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rnf20Q5DTM8 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rnf20Q5DTM8 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rnf20Q5DTM8 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rnf20Q5DTM8 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC16.67■□□□□ 0.26
Rnf20Q5DTM8 Gm25948-201ENSMUST00000175334 112 ntBASIC16.67■□□□□ 0.26
Rnf20Q5DTM8 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC16.67■□□□□ 0.26
Rnf20Q5DTM8 AC124732.2-201ENSMUST00000221977 316 ntBASIC16.67■□□□□ 0.26
Rnf20Q5DTM8 AC156016.3-201ENSMUST00000228623 344 ntBASIC16.67■□□□□ 0.26
Rnf20Q5DTM8 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rnf20Q5DTM8 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rnf20Q5DTM8 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rnf20Q5DTM8 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rnf20Q5DTM8 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rnf20Q5DTM8 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rnf20Q5DTM8 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rnf20Q5DTM8 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rnf20Q5DTM8 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rnf20Q5DTM8 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rnf20Q5DTM8 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rnf20Q5DTM8 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rnf20Q5DTM8 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rnf20Q5DTM8 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rnf20Q5DTM8 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rnf20Q5DTM8 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
Rnf20Q5DTM8 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC16.67■□□□□ 0.26
Rnf20Q5DTM8 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rnf20Q5DTM8 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rnf20Q5DTM8 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf20Q5DTM8 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf20Q5DTM8 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Rnf20Q5DTM8 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf20Q5DTM8 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
Rnf20Q5DTM8 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf20Q5DTM8 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Rnf20Q5DTM8 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf20Q5DTM8 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC16.66■□□□□ 0.26
Rnf20Q5DTM8 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf20Q5DTM8 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC16.66■□□□□ 0.26
Rnf20Q5DTM8 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf20Q5DTM8 Gm12428-201ENSMUST00000119844 727 ntBASIC16.66■□□□□ 0.26
Rnf20Q5DTM8 Mir1897-201ENSMUST00000122581 272 ntBASIC16.66■□□□□ 0.26
Rnf20Q5DTM8 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC16.66■□□□□ 0.26
Rnf20Q5DTM8 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf20Q5DTM8 Gm37714-201ENSMUST00000194742 342 ntBASIC16.66■□□□□ 0.26
Rnf20Q5DTM8 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Rnf20Q5DTM8 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf20Q5DTM8 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf20Q5DTM8 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC16.66■□□□□ 0.26
Rnf20Q5DTM8 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf20Q5DTM8 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf20Q5DTM8 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf20Q5DTM8 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf20Q5DTM8 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Rnf20Q5DTM8 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf20Q5DTM8 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Rnf20Q5DTM8 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Rnf20Q5DTM8 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf20Q5DTM8 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf20Q5DTM8 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Rnf20Q5DTM8 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rnf20Q5DTM8 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms