Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Shank3Q4ACU6 Gm25214-201ENSMUST00000104573 129 ntBASIC17.02■□□□□ 0.32
Shank3Q4ACU6 Gm11978-201ENSMUST00000122315 466 ntBASIC17.02■□□□□ 0.32
Shank3Q4ACU6 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC17.02■□□□□ 0.32
Shank3Q4ACU6 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Shank3Q4ACU6 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Shank3Q4ACU6 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Shank3Q4ACU6 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Shank3Q4ACU6 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.31
Shank3Q4ACU6 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Shank3Q4ACU6 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Shank3Q4ACU6 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Shank3Q4ACU6 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Shank3Q4ACU6 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Shank3Q4ACU6 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Shank3Q4ACU6 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Shank3Q4ACU6 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Shank3Q4ACU6 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Shank3Q4ACU6 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC17.01■□□□□ 0.31
Shank3Q4ACU6 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC17.01■□□□□ 0.31
Shank3Q4ACU6 Morn2-202ENSMUST00000227729 656 ntBASIC17.01■□□□□ 0.31
Shank3Q4ACU6 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Shank3Q4ACU6 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Shank3Q4ACU6 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Shank3Q4ACU6 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Shank3Q4ACU6 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Shank3Q4ACU6 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC17.01■□□□□ 0.31
Shank3Q4ACU6 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Shank3Q4ACU6 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Shank3Q4ACU6 Gm45504-201ENSMUST00000211407 2107 ntBASIC17.01■□□□□ 0.31
Shank3Q4ACU6 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Shank3Q4ACU6 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Shank3Q4ACU6 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Shank3Q4ACU6 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Shank3Q4ACU6 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Shank3Q4ACU6 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Shank3Q4ACU6 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Shank3Q4ACU6 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Shank3Q4ACU6 Gm25732-201ENSMUST00000175168 60 ntBASIC17.01■□□□□ 0.31
Shank3Q4ACU6 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Shank3Q4ACU6 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Shank3Q4ACU6 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Shank3Q4ACU6 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC17.01■□□□□ 0.31
Shank3Q4ACU6 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Shank3Q4ACU6 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Shank3Q4ACU6 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Shank3Q4ACU6 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC17■□□□□ 0.31
Shank3Q4ACU6 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Shank3Q4ACU6 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Shank3Q4ACU6 AC096628.2-201ENSMUST00000225443 1413 ntBASIC17■□□□□ 0.31
Shank3Q4ACU6 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Shank3Q4ACU6 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Shank3Q4ACU6 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Shank3Q4ACU6 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Shank3Q4ACU6 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC17■□□□□ 0.31
Shank3Q4ACU6 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Shank3Q4ACU6 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC17■□□□□ 0.31
Shank3Q4ACU6 Gm4819-201ENSMUST00000182170 1009 ntBASIC17■□□□□ 0.31
Shank3Q4ACU6 Mir7032-201ENSMUST00000185154 79 ntBASIC17■□□□□ 0.31
Shank3Q4ACU6 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Shank3Q4ACU6 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC17■□□□□ 0.31
Shank3Q4ACU6 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC17■□□□□ 0.31
Shank3Q4ACU6 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Shank3Q4ACU6 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC17■□□□□ 0.31
Shank3Q4ACU6 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC17■□□□□ 0.31
Shank3Q4ACU6 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Shank3Q4ACU6 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC17■□□□□ 0.31
Shank3Q4ACU6 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Shank3Q4ACU6 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Shank3Q4ACU6 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Shank3Q4ACU6 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC17■□□□□ 0.31
Shank3Q4ACU6 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Shank3Q4ACU6 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
Shank3Q4ACU6 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Shank3Q4ACU6 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Shank3Q4ACU6 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC16.99■□□□□ 0.31
Shank3Q4ACU6 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Shank3Q4ACU6 Gm43598-201ENSMUST00000202482 2479 ntBASIC16.99■□□□□ 0.31
Shank3Q4ACU6 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC16.99■□□□□ 0.31
Shank3Q4ACU6 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC16.99■□□□□ 0.31
Shank3Q4ACU6 Gm24514-201ENSMUST00000174961 285 ntBASIC16.99■□□□□ 0.31
Shank3Q4ACU6 Gm16505-201ENSMUST00000179981 232 ntBASIC16.99■□□□□ 0.31
Shank3Q4ACU6 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC16.99■□□□□ 0.31
Shank3Q4ACU6 Gm37042-201ENSMUST00000193816 581 ntBASIC16.99■□□□□ 0.31
Shank3Q4ACU6 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Shank3Q4ACU6 AC122305.4-201ENSMUST00000216159 1206 ntBASIC16.99■□□□□ 0.31
Shank3Q4ACU6 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Shank3Q4ACU6 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC16.99■□□□□ 0.31
Shank3Q4ACU6 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Shank3Q4ACU6 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Shank3Q4ACU6 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Shank3Q4ACU6 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
Shank3Q4ACU6 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Shank3Q4ACU6 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC16.99■□□□□ 0.31
Shank3Q4ACU6 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Shank3Q4ACU6 Gm24830-201ENSMUST00000102024 166 ntBASIC16.99■□□□□ 0.31
Shank3Q4ACU6 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Shank3Q4ACU6 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Shank3Q4ACU6 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Shank3Q4ACU6 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms