Protein–RNA interactions for Protein: Q3V0C5

Usp48, Ubiquitin carboxyl-terminal hydrolase 48, mousemouse

Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp48Q3V0C5 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Usp48Q3V0C5 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp48Q3V0C5 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Usp48Q3V0C5 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC17.32■□□□□ 0.36
Usp48Q3V0C5 Gm6916-202ENSMUST00000205523 195 ntBASIC17.32■□□□□ 0.36
Usp48Q3V0C5 AC140451.2-201ENSMUST00000228030 664 ntBASIC17.32■□□□□ 0.36
Usp48Q3V0C5 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp48Q3V0C5 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp48Q3V0C5 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp48Q3V0C5 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp48Q3V0C5 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp48Q3V0C5 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp48Q3V0C5 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Usp48Q3V0C5 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Usp48Q3V0C5 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp48Q3V0C5 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Usp48Q3V0C5 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp48Q3V0C5 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp48Q3V0C5 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Usp48Q3V0C5 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Usp48Q3V0C5 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC17.31■□□□□ 0.36
Usp48Q3V0C5 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp48Q3V0C5 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp48Q3V0C5 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC17.31■□□□□ 0.36
Usp48Q3V0C5 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Usp48Q3V0C5 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp48Q3V0C5 Mir1894-201ENSMUST00000122802 81 ntBASIC17.31■□□□□ 0.36
Usp48Q3V0C5 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Usp48Q3V0C5 Gm37424-201ENSMUST00000191727 561 ntBASIC17.31■□□□□ 0.36
Usp48Q3V0C5 Gm44974-201ENSMUST00000206387 1279 ntBASIC17.31■□□□□ 0.36
Usp48Q3V0C5 Gm7067-201ENSMUST00000207698 1249 ntBASIC17.31■□□□□ 0.36
Usp48Q3V0C5 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC17.31■□□□□ 0.36
Usp48Q3V0C5 Gm17794-201ENSMUST00000220252 955 ntBASIC17.31■□□□□ 0.36
Usp48Q3V0C5 Gm7446-201ENSMUST00000221035 1240 ntBASIC17.31■□□□□ 0.36
Usp48Q3V0C5 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC17.31■□□□□ 0.36
Usp48Q3V0C5 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp48Q3V0C5 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp48Q3V0C5 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp48Q3V0C5 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Usp48Q3V0C5 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp48Q3V0C5 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Usp48Q3V0C5 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp48Q3V0C5 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp48Q3V0C5 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Usp48Q3V0C5 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
Usp48Q3V0C5 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC17.31■□□□□ 0.36
Usp48Q3V0C5 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp48Q3V0C5 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Usp48Q3V0C5 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Usp48Q3V0C5 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp48Q3V0C5 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp48Q3V0C5 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp48Q3V0C5 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp48Q3V0C5 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Usp48Q3V0C5 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp48Q3V0C5 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC17.3■□□□□ 0.36
Usp48Q3V0C5 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC17.3■□□□□ 0.36
Usp48Q3V0C5 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC17.3■□□□□ 0.36
Usp48Q3V0C5 Gm7558-201ENSMUST00000193221 1165 ntBASIC17.3■□□□□ 0.36
Usp48Q3V0C5 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Usp48Q3V0C5 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC17.3■□□□□ 0.36
Usp48Q3V0C5 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp48Q3V0C5 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC17.3■□□□□ 0.36
Usp48Q3V0C5 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp48Q3V0C5 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp48Q3V0C5 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Usp48Q3V0C5 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp48Q3V0C5 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp48Q3V0C5 Gm45751-201ENSMUST00000210185 1573 ntBASIC17.3■□□□□ 0.36
Usp48Q3V0C5 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp48Q3V0C5 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp48Q3V0C5 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp48Q3V0C5 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Usp48Q3V0C5 Gm45760-201ENSMUST00000212190 1782 ntBASIC17.3■□□□□ 0.36
Usp48Q3V0C5 Gm9816-201ENSMUST00000122292 1414 ntBASIC17.3■□□□□ 0.36
Usp48Q3V0C5 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC17.29■□□□□ 0.36
Usp48Q3V0C5 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Usp48Q3V0C5 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC17.29■□□□□ 0.36
Usp48Q3V0C5 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp48Q3V0C5 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp48Q3V0C5 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
Usp48Q3V0C5 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Usp48Q3V0C5 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp48Q3V0C5 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp48Q3V0C5 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp48Q3V0C5 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Usp48Q3V0C5 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Usp48Q3V0C5 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Usp48Q3V0C5 Gm33320-201ENSMUST00000192232 530 ntBASIC17.29■□□□□ 0.36
Usp48Q3V0C5 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Usp48Q3V0C5 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC17.29■□□□□ 0.36
Usp48Q3V0C5 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp48Q3V0C5 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp48Q3V0C5 AC154527.2-201ENSMUST00000225256 1466 ntBASIC17.29■□□□□ 0.36
Usp48Q3V0C5 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp48Q3V0C5 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp48Q3V0C5 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp48Q3V0C5 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Usp48Q3V0C5 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Usp48Q3V0C5 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms