Protein–RNA interactions for Protein: Q3USH5

Sfswap, Splicing factor, suppressor of white-apricot homolog, mousemouse

Known RBP Predictions only

Length 945 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SfswapQ3USH5 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SfswapQ3USH5 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SfswapQ3USH5 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SfswapQ3USH5 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SfswapQ3USH5 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SfswapQ3USH5 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SfswapQ3USH5 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
SfswapQ3USH5 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SfswapQ3USH5 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SfswapQ3USH5 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
SfswapQ3USH5 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SfswapQ3USH5 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
SfswapQ3USH5 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC16.65■□□□□ 0.26
SfswapQ3USH5 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SfswapQ3USH5 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC16.65■□□□□ 0.26
SfswapQ3USH5 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
SfswapQ3USH5 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SfswapQ3USH5 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
SfswapQ3USH5 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
SfswapQ3USH5 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
SfswapQ3USH5 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SfswapQ3USH5 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SfswapQ3USH5 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SfswapQ3USH5 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SfswapQ3USH5 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SfswapQ3USH5 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC16.65■□□□□ 0.26
SfswapQ3USH5 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
SfswapQ3USH5 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
SfswapQ3USH5 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SfswapQ3USH5 AC156560.2-201ENSMUST00000221232 264 ntBASIC16.65■□□□□ 0.26
SfswapQ3USH5 Mir497b-201ENSMUST00000093601 125 ntBASIC16.65■□□□□ 0.26
SfswapQ3USH5 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SfswapQ3USH5 Gm9347-201ENSMUST00000211473 1607 ntBASIC16.65■□□□□ 0.26
SfswapQ3USH5 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SfswapQ3USH5 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SfswapQ3USH5 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
SfswapQ3USH5 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
SfswapQ3USH5 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC16.65■□□□□ 0.26
SfswapQ3USH5 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SfswapQ3USH5 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
SfswapQ3USH5 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SfswapQ3USH5 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
SfswapQ3USH5 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SfswapQ3USH5 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC16.65■□□□□ 0.26
SfswapQ3USH5 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC16.65■□□□□ 0.26
SfswapQ3USH5 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SfswapQ3USH5 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SfswapQ3USH5 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SfswapQ3USH5 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SfswapQ3USH5 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SfswapQ3USH5 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SfswapQ3USH5 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SfswapQ3USH5 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
SfswapQ3USH5 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SfswapQ3USH5 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SfswapQ3USH5 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC16.64■□□□□ 0.25
SfswapQ3USH5 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC16.64■□□□□ 0.25
SfswapQ3USH5 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC16.64■□□□□ 0.25
SfswapQ3USH5 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
SfswapQ3USH5 Gm8602-201ENSMUST00000184045 607 ntBASIC16.64■□□□□ 0.25
SfswapQ3USH5 Ighv1-51-201ENSMUST00000192903 354 ntBASIC16.64■□□□□ 0.25
SfswapQ3USH5 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC16.64■□□□□ 0.25
SfswapQ3USH5 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC16.64■□□□□ 0.25
SfswapQ3USH5 Gm18307-201ENSMUST00000206864 949 ntBASIC16.64■□□□□ 0.25
SfswapQ3USH5 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC16.64■□□□□ 0.25
SfswapQ3USH5 Cdk7-205ENSMUST00000225990 1159 ntBASIC16.64■□□□□ 0.25
SfswapQ3USH5 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SfswapQ3USH5 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SfswapQ3USH5 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
SfswapQ3USH5 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SfswapQ3USH5 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SfswapQ3USH5 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SfswapQ3USH5 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SfswapQ3USH5 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SfswapQ3USH5 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SfswapQ3USH5 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SfswapQ3USH5 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
SfswapQ3USH5 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
SfswapQ3USH5 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SfswapQ3USH5 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SfswapQ3USH5 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
SfswapQ3USH5 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SfswapQ3USH5 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
SfswapQ3USH5 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SfswapQ3USH5 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
SfswapQ3USH5 Gm38037-201ENSMUST00000192600 1624 ntBASIC16.63■□□□□ 0.25
SfswapQ3USH5 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
SfswapQ3USH5 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SfswapQ3USH5 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SfswapQ3USH5 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
SfswapQ3USH5 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SfswapQ3USH5 Gm12960-201ENSMUST00000120017 1066 ntBASIC16.63■□□□□ 0.25
SfswapQ3USH5 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SfswapQ3USH5 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SfswapQ3USH5 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SfswapQ3USH5 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SfswapQ3USH5 Mir7654-201ENSMUST00000185082 70 ntBASIC16.63■□□□□ 0.25
SfswapQ3USH5 Gm28911-201ENSMUST00000188837 117 ntBASIC16.63■□□□□ 0.25
SfswapQ3USH5 Gm7558-201ENSMUST00000193221 1165 ntBASIC16.63■□□□□ 0.25
SfswapQ3USH5 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms