Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Fam196aQ3USH1 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Fam196aQ3USH1 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Fam196aQ3USH1 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Fam196aQ3USH1 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
Fam196aQ3USH1 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC13.98□□□□□ -0.17
Fam196aQ3USH1 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Fam196aQ3USH1 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Fam196aQ3USH1 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Fam196aQ3USH1 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC13.98□□□□□ -0.17
Fam196aQ3USH1 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC13.98□□□□□ -0.17
Fam196aQ3USH1 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Fam196aQ3USH1 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Fam196aQ3USH1 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC13.98□□□□□ -0.17
Fam196aQ3USH1 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC13.98□□□□□ -0.17
Fam196aQ3USH1 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC13.98□□□□□ -0.17
Fam196aQ3USH1 Gm8227-201ENSMUST00000223306 571 ntBASIC13.98□□□□□ -0.17
Fam196aQ3USH1 Itm2b-204ENSMUST00000228637 783 ntBASIC13.98□□□□□ -0.17
Fam196aQ3USH1 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC13.98□□□□□ -0.17
Fam196aQ3USH1 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Fam196aQ3USH1 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Fam196aQ3USH1 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Fam196aQ3USH1 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC13.98□□□□□ -0.17
Fam196aQ3USH1 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Fam196aQ3USH1 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Fam196aQ3USH1 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Fam196aQ3USH1 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Fam196aQ3USH1 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Fam196aQ3USH1 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Fam196aQ3USH1 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Fam196aQ3USH1 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Fam196aQ3USH1 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Fam196aQ3USH1 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
Fam196aQ3USH1 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Fam196aQ3USH1 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Fam196aQ3USH1 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Fam196aQ3USH1 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC13.97□□□□□ -0.17
Fam196aQ3USH1 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC13.97□□□□□ -0.17
Fam196aQ3USH1 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Fam196aQ3USH1 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Fam196aQ3USH1 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Fam196aQ3USH1 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Fam196aQ3USH1 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Fam196aQ3USH1 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Fam196aQ3USH1 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Fam196aQ3USH1 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Fam196aQ3USH1 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC13.97□□□□□ -0.17
Fam196aQ3USH1 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC13.97□□□□□ -0.17
Fam196aQ3USH1 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC13.97□□□□□ -0.17
Fam196aQ3USH1 AC132384.14-201ENSMUST00000219346 1147 ntBASIC13.97□□□□□ -0.17
Fam196aQ3USH1 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Fam196aQ3USH1 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Fam196aQ3USH1 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Fam196aQ3USH1 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Fam196aQ3USH1 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
Fam196aQ3USH1 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Fam196aQ3USH1 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Fam196aQ3USH1 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC13.97□□□□□ -0.17
Fam196aQ3USH1 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Fam196aQ3USH1 Gm42471-201ENSMUST00000201457 1865 ntBASIC13.97□□□□□ -0.17
Fam196aQ3USH1 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Fam196aQ3USH1 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Fam196aQ3USH1 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC13.97□□□□□ -0.17
Fam196aQ3USH1 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Fam196aQ3USH1 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Fam196aQ3USH1 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Fam196aQ3USH1 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC13.96□□□□□ -0.17
Fam196aQ3USH1 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Fam196aQ3USH1 Gm45760-201ENSMUST00000212190 1782 ntBASIC13.96□□□□□ -0.17
Fam196aQ3USH1 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Fam196aQ3USH1 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Fam196aQ3USH1 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Fam196aQ3USH1 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Fam196aQ3USH1 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Fam196aQ3USH1 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC13.96□□□□□ -0.17
Fam196aQ3USH1 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Fam196aQ3USH1 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Fam196aQ3USH1 Gm5687-201ENSMUST00000118252 640 ntBASIC13.96□□□□□ -0.17
Fam196aQ3USH1 Gm13369-201ENSMUST00000119442 987 ntBASIC13.96□□□□□ -0.17
Fam196aQ3USH1 Gm25261-201ENSMUST00000157416 134 ntBASIC13.96□□□□□ -0.17
Fam196aQ3USH1 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC13.96□□□□□ -0.17
Fam196aQ3USH1 Gm30437-201ENSMUST00000206086 1201 ntBASIC13.96□□□□□ -0.17
Fam196aQ3USH1 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Fam196aQ3USH1 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Fam196aQ3USH1 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Fam196aQ3USH1 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
Fam196aQ3USH1 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Fam196aQ3USH1 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Fam196aQ3USH1 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Fam196aQ3USH1 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Fam196aQ3USH1 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Fam196aQ3USH1 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Fam196aQ3USH1 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Fam196aQ3USH1 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Fam196aQ3USH1 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Fam196aQ3USH1 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Fam196aQ3USH1 AC163637.1-201ENSMUST00000215491 1894 ntBASIC13.95□□□□□ -0.18
Fam196aQ3USH1 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Fam196aQ3USH1 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Fam196aQ3USH1 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms