Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Cks1brtQ3UNC9 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Cks1brtQ3UNC9 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cks1brtQ3UNC9 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cks1brtQ3UNC9 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cks1brtQ3UNC9 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cks1brtQ3UNC9 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Cks1brtQ3UNC9 AC139054.1-201ENSMUST00000226898 1598 ntBASIC10.04□□□□□ -0.8
Cks1brtQ3UNC9 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cks1brtQ3UNC9 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Cks1brtQ3UNC9 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cks1brtQ3UNC9 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cks1brtQ3UNC9 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC10.04□□□□□ -0.8
Cks1brtQ3UNC9 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Cks1brtQ3UNC9 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cks1brtQ3UNC9 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Cks1brtQ3UNC9 Gm9279-201ENSMUST00000223175 1606 ntBASIC10.04□□□□□ -0.8
Cks1brtQ3UNC9 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Cks1brtQ3UNC9 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Cks1brtQ3UNC9 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cks1brtQ3UNC9 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC10.03□□□□□ -0.8
Cks1brtQ3UNC9 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cks1brtQ3UNC9 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC10.03□□□□□ -0.8
Cks1brtQ3UNC9 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cks1brtQ3UNC9 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cks1brtQ3UNC9 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Cks1brtQ3UNC9 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cks1brtQ3UNC9 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC10.03□□□□□ -0.8
Cks1brtQ3UNC9 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Cks1brtQ3UNC9 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cks1brtQ3UNC9 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cks1brtQ3UNC9 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cks1brtQ3UNC9 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Cks1brtQ3UNC9 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC10.03□□□□□ -0.8
Cks1brtQ3UNC9 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cks1brtQ3UNC9 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Cks1brtQ3UNC9 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cks1brtQ3UNC9 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cks1brtQ3UNC9 AC159205.6-201ENSMUST00000224935 887 ntBASIC10.03□□□□□ -0.8
Cks1brtQ3UNC9 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cks1brtQ3UNC9 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cks1brtQ3UNC9 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cks1brtQ3UNC9 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cks1brtQ3UNC9 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC10.03□□□□□ -0.8
Cks1brtQ3UNC9 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cks1brtQ3UNC9 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Cks1brtQ3UNC9 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cks1brtQ3UNC9 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cks1brtQ3UNC9 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Cks1brtQ3UNC9 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Cks1brtQ3UNC9 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cks1brtQ3UNC9 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cks1brtQ3UNC9 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cks1brtQ3UNC9 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cks1brtQ3UNC9 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC10.03□□□□□ -0.8
Cks1brtQ3UNC9 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC10.03□□□□□ -0.8
Cks1brtQ3UNC9 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cks1brtQ3UNC9 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cks1brtQ3UNC9 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cks1brtQ3UNC9 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cks1brtQ3UNC9 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Cks1brtQ3UNC9 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC10.02□□□□□ -0.8
Cks1brtQ3UNC9 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.8
Cks1brtQ3UNC9 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Cks1brtQ3UNC9 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Cks1brtQ3UNC9 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Cks1brtQ3UNC9 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Cks1brtQ3UNC9 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.8
Cks1brtQ3UNC9 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.8
Cks1brtQ3UNC9 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.8
Cks1brtQ3UNC9 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cks1brtQ3UNC9 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Cks1brtQ3UNC9 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
Cks1brtQ3UNC9 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cks1brtQ3UNC9 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cks1brtQ3UNC9 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cks1brtQ3UNC9 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cks1brtQ3UNC9 Gm37133-201ENSMUST00000192705 1922 ntBASIC10.02□□□□□ -0.81
Cks1brtQ3UNC9 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cks1brtQ3UNC9 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cks1brtQ3UNC9 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Cks1brtQ3UNC9 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
Cks1brtQ3UNC9 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
Cks1brtQ3UNC9 Gm11355-201ENSMUST00000121120 306 ntBASIC10.02□□□□□ -0.81
Cks1brtQ3UNC9 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Cks1brtQ3UNC9 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cks1brtQ3UNC9 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC10.02□□□□□ -0.81
Cks1brtQ3UNC9 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cks1brtQ3UNC9 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cks1brtQ3UNC9 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cks1brtQ3UNC9 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cks1brtQ3UNC9 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cks1brtQ3UNC9 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC10.02□□□□□ -0.81
Cks1brtQ3UNC9 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cks1brtQ3UNC9 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC10.02□□□□□ -0.81
Cks1brtQ3UNC9 Gm7002-201ENSMUST00000221386 2165 ntBASIC10.02□□□□□ -0.81
Cks1brtQ3UNC9 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cks1brtQ3UNC9 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cks1brtQ3UNC9 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cks1brtQ3UNC9 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms