Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Brf2Q3UAW9 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Brf2Q3UAW9 Gm43399-201ENSMUST00000202546 2374 ntBASIC13.2□□□□□ -0.3
Brf2Q3UAW9 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Brf2Q3UAW9 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC13.2□□□□□ -0.3
Brf2Q3UAW9 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC13.2□□□□□ -0.3
Brf2Q3UAW9 Gm6736-201ENSMUST00000166583 948 ntBASIC13.2□□□□□ -0.3
Brf2Q3UAW9 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Brf2Q3UAW9 Gm29541-201ENSMUST00000191351 678 ntBASIC13.2□□□□□ -0.3
Brf2Q3UAW9 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Brf2Q3UAW9 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Brf2Q3UAW9 AC090659.2-201ENSMUST00000225378 1186 ntBASIC13.2□□□□□ -0.3
Brf2Q3UAW9 AC139350.3-201ENSMUST00000226151 420 ntBASIC13.2□□□□□ -0.3
Brf2Q3UAW9 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Brf2Q3UAW9 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
Brf2Q3UAW9 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Brf2Q3UAW9 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Brf2Q3UAW9 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Brf2Q3UAW9 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Brf2Q3UAW9 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Brf2Q3UAW9 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Brf2Q3UAW9 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Brf2Q3UAW9 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Brf2Q3UAW9 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Brf2Q3UAW9 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Brf2Q3UAW9 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Brf2Q3UAW9 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Brf2Q3UAW9 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Brf2Q3UAW9 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC13.2□□□□□ -0.3
Brf2Q3UAW9 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Brf2Q3UAW9 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Brf2Q3UAW9 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Brf2Q3UAW9 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Brf2Q3UAW9 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Brf2Q3UAW9 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Brf2Q3UAW9 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Brf2Q3UAW9 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Brf2Q3UAW9 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Brf2Q3UAW9 Gm45546-201ENSMUST00000211053 2394 ntBASIC13.2□□□□□ -0.3
Brf2Q3UAW9 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Brf2Q3UAW9 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC13.2□□□□□ -0.3
Brf2Q3UAW9 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Brf2Q3UAW9 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Brf2Q3UAW9 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Brf2Q3UAW9 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Brf2Q3UAW9 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Brf2Q3UAW9 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Brf2Q3UAW9 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Brf2Q3UAW9 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Brf2Q3UAW9 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Brf2Q3UAW9 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Brf2Q3UAW9 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC13.19□□□□□ -0.3
Brf2Q3UAW9 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Brf2Q3UAW9 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC13.19□□□□□ -0.3
Brf2Q3UAW9 Gm43073-201ENSMUST00000198200 1189 ntBASIC13.19□□□□□ -0.3
Brf2Q3UAW9 Gm5312-201ENSMUST00000203728 547 ntBASIC13.19□□□□□ -0.3
Brf2Q3UAW9 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC13.19□□□□□ -0.3
Brf2Q3UAW9 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Brf2Q3UAW9 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC13.19□□□□□ -0.3
Brf2Q3UAW9 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Brf2Q3UAW9 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Brf2Q3UAW9 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
Brf2Q3UAW9 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Brf2Q3UAW9 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Brf2Q3UAW9 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Brf2Q3UAW9 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC13.19□□□□□ -0.3
Brf2Q3UAW9 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Brf2Q3UAW9 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Brf2Q3UAW9 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Brf2Q3UAW9 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Brf2Q3UAW9 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Brf2Q3UAW9 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Brf2Q3UAW9 Gm15889-202ENSMUST00000212669 2443 ntBASIC13.19□□□□□ -0.3
Brf2Q3UAW9 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Brf2Q3UAW9 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Brf2Q3UAW9 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Brf2Q3UAW9 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Brf2Q3UAW9 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Brf2Q3UAW9 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Brf2Q3UAW9 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Brf2Q3UAW9 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Brf2Q3UAW9 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Brf2Q3UAW9 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Brf2Q3UAW9 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Brf2Q3UAW9 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Brf2Q3UAW9 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Brf2Q3UAW9 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Brf2Q3UAW9 Gm38391-201ENSMUST00000191720 4069 ntBASIC13.18□□□□□ -0.3
Brf2Q3UAW9 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Brf2Q3UAW9 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Brf2Q3UAW9 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Brf2Q3UAW9 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Brf2Q3UAW9 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Brf2Q3UAW9 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Brf2Q3UAW9 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Brf2Q3UAW9 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC13.18□□□□□ -0.3
Brf2Q3UAW9 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC13.18□□□□□ -0.3
Brf2Q3UAW9 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Brf2Q3UAW9 AC140397.2-201ENSMUST00000224213 834 ntBASIC13.18□□□□□ -0.3
Brf2Q3UAW9 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms