Protein–RNA interactions for Protein: Q3U435

Mmp25, Matrix metalloproteinase-25, mousemouse

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp25Q3U435 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Mmp25Q3U435 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Mmp25Q3U435 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Mmp25Q3U435 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Mmp25Q3U435 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Mmp25Q3U435 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Mmp25Q3U435 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Mmp25Q3U435 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Mmp25Q3U435 AC159196.2-201ENSMUST00000224082 1622 ntBASIC13.17□□□□□ -0.3
Mmp25Q3U435 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Mmp25Q3U435 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Mmp25Q3U435 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Mmp25Q3U435 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Mmp25Q3U435 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Mmp25Q3U435 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Mmp25Q3U435 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Mmp25Q3U435 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC13.16□□□□□ -0.3
Mmp25Q3U435 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Mmp25Q3U435 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Mmp25Q3U435 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Mmp25Q3U435 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC13.16□□□□□ -0.3
Mmp25Q3U435 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Mmp25Q3U435 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Mmp25Q3U435 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Mmp25Q3U435 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Mmp25Q3U435 Gm6912-201ENSMUST00000117218 544 ntBASIC13.16□□□□□ -0.3
Mmp25Q3U435 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Mmp25Q3U435 Gm21854-201ENSMUST00000179901 471 ntBASIC13.16□□□□□ -0.3
Mmp25Q3U435 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC13.16□□□□□ -0.3
Mmp25Q3U435 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Mmp25Q3U435 Gm5626-201ENSMUST00000222151 1058 ntBASIC13.16□□□□□ -0.3
Mmp25Q3U435 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Mmp25Q3U435 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
Mmp25Q3U435 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Mmp25Q3U435 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Mmp25Q3U435 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Mmp25Q3U435 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Mmp25Q3U435 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Mmp25Q3U435 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC13.16□□□□□ -0.3
Mmp25Q3U435 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Mmp25Q3U435 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Mmp25Q3U435 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Mmp25Q3U435 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Mmp25Q3U435 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Mmp25Q3U435 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC13.15□□□□□ -0.3
Mmp25Q3U435 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
Mmp25Q3U435 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Mmp25Q3U435 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC13.15□□□□□ -0.3
Mmp25Q3U435 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Mmp25Q3U435 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Mmp25Q3U435 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Mmp25Q3U435 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Mmp25Q3U435 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC13.15□□□□□ -0.3
Mmp25Q3U435 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Mmp25Q3U435 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Mmp25Q3U435 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC13.15□□□□□ -0.3
Mmp25Q3U435 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Mmp25Q3U435 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Mmp25Q3U435 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC13.15□□□□□ -0.3
Mmp25Q3U435 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Mmp25Q3U435 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC13.15□□□□□ -0.3
Mmp25Q3U435 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Mmp25Q3U435 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Mmp25Q3U435 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Mmp25Q3U435 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Mmp25Q3U435 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Mmp25Q3U435 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Mmp25Q3U435 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.31
Mmp25Q3U435 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Mmp25Q3U435 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Mmp25Q3U435 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Mmp25Q3U435 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Mmp25Q3U435 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Mmp25Q3U435 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Mmp25Q3U435 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Mmp25Q3U435 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
Mmp25Q3U435 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Mmp25Q3U435 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Mmp25Q3U435 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC13.14□□□□□ -0.31
Mmp25Q3U435 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Mmp25Q3U435 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Mmp25Q3U435 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Mmp25Q3U435 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Mmp25Q3U435 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Mmp25Q3U435 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC13.14□□□□□ -0.31
Mmp25Q3U435 Gm13385-201ENSMUST00000121089 220 ntBASIC13.14□□□□□ -0.31
Mmp25Q3U435 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Mmp25Q3U435 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Mmp25Q3U435 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Mmp25Q3U435 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC13.14□□□□□ -0.31
Mmp25Q3U435 AC166997.1-201ENSMUST00000225122 572 ntBASIC13.14□□□□□ -0.31
Mmp25Q3U435 Gm9797-201ENSMUST00000052902 613 ntBASIC13.14□□□□□ -0.31
Mmp25Q3U435 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Mmp25Q3U435 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Mmp25Q3U435 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Mmp25Q3U435 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Mmp25Q3U435 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Mmp25Q3U435 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Mmp25Q3U435 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC13.14□□□□□ -0.31
Mmp25Q3U435 Nupl1-207ENSMUST00000225311 2475 ntBASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms