Protein–RNA interactions for Protein: Q2EG98

Pkd1l3, Polycystic kidney disease protein 1-like 3, mousemouse

Predictions only

Length 2,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1l3Q2EG98 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pkd1l3Q2EG98 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pkd1l3Q2EG98 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pkd1l3Q2EG98 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC12.55□□□□□ -0.4
Pkd1l3Q2EG98 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pkd1l3Q2EG98 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pkd1l3Q2EG98 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pkd1l3Q2EG98 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pkd1l3Q2EG98 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pkd1l3Q2EG98 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Pkd1l3Q2EG98 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pkd1l3Q2EG98 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pkd1l3Q2EG98 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pkd1l3Q2EG98 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pkd1l3Q2EG98 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pkd1l3Q2EG98 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pkd1l3Q2EG98 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC12.55□□□□□ -0.4
Pkd1l3Q2EG98 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pkd1l3Q2EG98 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pkd1l3Q2EG98 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pkd1l3Q2EG98 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pkd1l3Q2EG98 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pkd1l3Q2EG98 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC12.55□□□□□ -0.4
Pkd1l3Q2EG98 Mir1894-201ENSMUST00000122802 81 ntBASIC12.55□□□□□ -0.4
Pkd1l3Q2EG98 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pkd1l3Q2EG98 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pkd1l3Q2EG98 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pkd1l3Q2EG98 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pkd1l3Q2EG98 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Pkd1l3Q2EG98 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pkd1l3Q2EG98 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Pkd1l3Q2EG98 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Pkd1l3Q2EG98 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pkd1l3Q2EG98 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pkd1l3Q2EG98 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pkd1l3Q2EG98 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pkd1l3Q2EG98 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pkd1l3Q2EG98 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pkd1l3Q2EG98 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pkd1l3Q2EG98 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pkd1l3Q2EG98 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pkd1l3Q2EG98 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pkd1l3Q2EG98 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pkd1l3Q2EG98 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pkd1l3Q2EG98 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pkd1l3Q2EG98 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Pkd1l3Q2EG98 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pkd1l3Q2EG98 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pkd1l3Q2EG98 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC12.54□□□□□ -0.4
Pkd1l3Q2EG98 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pkd1l3Q2EG98 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pkd1l3Q2EG98 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pkd1l3Q2EG98 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC12.54□□□□□ -0.4
Pkd1l3Q2EG98 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC12.54□□□□□ -0.4
Pkd1l3Q2EG98 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pkd1l3Q2EG98 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pkd1l3Q2EG98 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pkd1l3Q2EG98 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pkd1l3Q2EG98 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pkd1l3Q2EG98 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pkd1l3Q2EG98 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pkd1l3Q2EG98 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pkd1l3Q2EG98 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pkd1l3Q2EG98 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pkd1l3Q2EG98 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pkd1l3Q2EG98 Gm9867-201ENSMUST00000192212 2647 ntBASIC12.54□□□□□ -0.4
Pkd1l3Q2EG98 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC12.54□□□□□ -0.4
Pkd1l3Q2EG98 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC12.54□□□□□ -0.4
Pkd1l3Q2EG98 Mir7085-201ENSMUST00000184353 66 ntBASIC12.54□□□□□ -0.4
Pkd1l3Q2EG98 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC12.54□□□□□ -0.4
Pkd1l3Q2EG98 AC155252.1-201ENSMUST00000226462 1208 ntBASIC12.54□□□□□ -0.4
Pkd1l3Q2EG98 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pkd1l3Q2EG98 Gm15823-201ENSMUST00000064305 670 ntBASIC12.54□□□□□ -0.4
Pkd1l3Q2EG98 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pkd1l3Q2EG98 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pkd1l3Q2EG98 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pkd1l3Q2EG98 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Pkd1l3Q2EG98 Gm43598-201ENSMUST00000202482 2479 ntBASIC12.54□□□□□ -0.4
Pkd1l3Q2EG98 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pkd1l3Q2EG98 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC12.54□□□□□ -0.4
Pkd1l3Q2EG98 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pkd1l3Q2EG98 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Pkd1l3Q2EG98 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pkd1l3Q2EG98 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pkd1l3Q2EG98 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Pkd1l3Q2EG98 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pkd1l3Q2EG98 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pkd1l3Q2EG98 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Pkd1l3Q2EG98 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC12.53□□□□□ -0.4
Pkd1l3Q2EG98 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Pkd1l3Q2EG98 Gm6266-201ENSMUST00000203844 806 ntBASIC12.53□□□□□ -0.4
Pkd1l3Q2EG98 Gm5425-201ENSMUST00000214125 459 ntBASIC12.53□□□□□ -0.4
Pkd1l3Q2EG98 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pkd1l3Q2EG98 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pkd1l3Q2EG98 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Pkd1l3Q2EG98 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pkd1l3Q2EG98 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC12.53□□□□□ -0.4
Pkd1l3Q2EG98 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pkd1l3Q2EG98 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Pkd1l3Q2EG98 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms