Protein–RNA interactions for Protein: Q0PD08

Rab42, Ras-related protein Rab-42, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab42Q0PD08 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rab42Q0PD08 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
Rab42Q0PD08 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rab42Q0PD08 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rab42Q0PD08 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rab42Q0PD08 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rab42Q0PD08 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rab42Q0PD08 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rab42Q0PD08 Gm11873-201ENSMUST00000117877 1304 ntBASIC12.4□□□□□ -0.42
Rab42Q0PD08 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rab42Q0PD08 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rab42Q0PD08 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rab42Q0PD08 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Rab42Q0PD08 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rab42Q0PD08 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rab42Q0PD08 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rab42Q0PD08 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.4□□□□□ -0.42
Rab42Q0PD08 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC12.4□□□□□ -0.42
Rab42Q0PD08 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rab42Q0PD08 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rab42Q0PD08 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Rab42Q0PD08 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rab42Q0PD08 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rab42Q0PD08 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rab42Q0PD08 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rab42Q0PD08 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rab42Q0PD08 Gm18733-201ENSMUST00000173950 856 ntBASIC12.4□□□□□ -0.42
Rab42Q0PD08 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC12.4□□□□□ -0.42
Rab42Q0PD08 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Rab42Q0PD08 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rab42Q0PD08 AC138767.1-201ENSMUST00000222661 415 ntBASIC12.4□□□□□ -0.42
Rab42Q0PD08 Mzt1-203ENSMUST00000227948 952 ntBASIC12.4□□□□□ -0.42
Rab42Q0PD08 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rab42Q0PD08 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rab42Q0PD08 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.4□□□□□ -0.42
Rab42Q0PD08 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rab42Q0PD08 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rab42Q0PD08 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Rab42Q0PD08 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Rab42Q0PD08 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Rab42Q0PD08 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Rab42Q0PD08 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Rab42Q0PD08 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Rab42Q0PD08 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.43
Rab42Q0PD08 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rab42Q0PD08 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rab42Q0PD08 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC12.39□□□□□ -0.43
Rab42Q0PD08 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rab42Q0PD08 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Rab42Q0PD08 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rab42Q0PD08 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC12.39□□□□□ -0.43
Rab42Q0PD08 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rab42Q0PD08 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rab42Q0PD08 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Rab42Q0PD08 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rab42Q0PD08 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rab42Q0PD08 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rab42Q0PD08 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.39□□□□□ -0.43
Rab42Q0PD08 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rab42Q0PD08 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Rab42Q0PD08 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rab42Q0PD08 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Rab42Q0PD08 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rab42Q0PD08 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rab42Q0PD08 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Rab42Q0PD08 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC12.39□□□□□ -0.43
Rab42Q0PD08 AC164567.1-201ENSMUST00000219185 960 ntBASIC12.39□□□□□ -0.43
Rab42Q0PD08 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rab42Q0PD08 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Rab42Q0PD08 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rab42Q0PD08 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC12.39□□□□□ -0.43
Rab42Q0PD08 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rab42Q0PD08 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rab42Q0PD08 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Rab42Q0PD08 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Rab42Q0PD08 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC12.39□□□□□ -0.43
Rab42Q0PD08 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rab42Q0PD08 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rab42Q0PD08 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC12.39□□□□□ -0.43
Rab42Q0PD08 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.39□□□□□ -0.43
Rab42Q0PD08 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rab42Q0PD08 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC12.39□□□□□ -0.43
Rab42Q0PD08 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rab42Q0PD08 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rab42Q0PD08 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rab42Q0PD08 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rab42Q0PD08 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
Rab42Q0PD08 Gm21009-201ENSMUST00000197169 1669 ntBASIC12.38□□□□□ -0.43
Rab42Q0PD08 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rab42Q0PD08 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rab42Q0PD08 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rab42Q0PD08 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rab42Q0PD08 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rab42Q0PD08 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rab42Q0PD08 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Rab42Q0PD08 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Rab42Q0PD08 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Rab42Q0PD08 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rab42Q0PD08 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rab42Q0PD08 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms