Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ptchd3Q0EEE2 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ptchd3Q0EEE2 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ptchd3Q0EEE2 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Ptchd3Q0EEE2 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Ptchd3Q0EEE2 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ptchd3Q0EEE2 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ptchd3Q0EEE2 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ptchd3Q0EEE2 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Ptchd3Q0EEE2 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ptchd3Q0EEE2 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Ptchd3Q0EEE2 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ptchd3Q0EEE2 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ptchd3Q0EEE2 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Ptchd3Q0EEE2 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC13.53□□□□□ -0.24
Ptchd3Q0EEE2 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC13.53□□□□□ -0.24
Ptchd3Q0EEE2 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC13.53□□□□□ -0.24
Ptchd3Q0EEE2 Gm16026-204ENSMUST00000162652 683 ntBASIC13.53□□□□□ -0.24
Ptchd3Q0EEE2 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC13.53□□□□□ -0.24
Ptchd3Q0EEE2 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ptchd3Q0EEE2 Bloc1s5-203ENSMUST00000224902 612 ntBASIC13.53□□□□□ -0.24
Ptchd3Q0EEE2 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ptchd3Q0EEE2 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ptchd3Q0EEE2 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ptchd3Q0EEE2 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ptchd3Q0EEE2 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ptchd3Q0EEE2 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ptchd3Q0EEE2 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ptchd3Q0EEE2 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ptchd3Q0EEE2 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Ptchd3Q0EEE2 Gm13410-201ENSMUST00000117058 1415 ntBASIC13.53□□□□□ -0.24
Ptchd3Q0EEE2 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC13.53□□□□□ -0.24
Ptchd3Q0EEE2 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ptchd3Q0EEE2 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ptchd3Q0EEE2 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ptchd3Q0EEE2 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Ptchd3Q0EEE2 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ptchd3Q0EEE2 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ptchd3Q0EEE2 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ptchd3Q0EEE2 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ptchd3Q0EEE2 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ptchd3Q0EEE2 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ptchd3Q0EEE2 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ptchd3Q0EEE2 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ptchd3Q0EEE2 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Ptchd3Q0EEE2 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ptchd3Q0EEE2 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Ptchd3Q0EEE2 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Ptchd3Q0EEE2 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ptchd3Q0EEE2 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC13.52□□□□□ -0.24
Ptchd3Q0EEE2 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Ptchd3Q0EEE2 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ptchd3Q0EEE2 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ptchd3Q0EEE2 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ptchd3Q0EEE2 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC13.52□□□□□ -0.25
Ptchd3Q0EEE2 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ptchd3Q0EEE2 Gm15467-201ENSMUST00000120582 445 ntBASIC13.52□□□□□ -0.25
Ptchd3Q0EEE2 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ptchd3Q0EEE2 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ptchd3Q0EEE2 Mir3113-201ENSMUST00000175478 76 ntBASIC13.52□□□□□ -0.25
Ptchd3Q0EEE2 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ptchd3Q0EEE2 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ptchd3Q0EEE2 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ptchd3Q0EEE2 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ptchd3Q0EEE2 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ptchd3Q0EEE2 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ptchd3Q0EEE2 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ptchd3Q0EEE2 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
Ptchd3Q0EEE2 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ptchd3Q0EEE2 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ptchd3Q0EEE2 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Ptchd3Q0EEE2 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ptchd3Q0EEE2 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ptchd3Q0EEE2 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ptchd3Q0EEE2 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ptchd3Q0EEE2 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ptchd3Q0EEE2 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ptchd3Q0EEE2 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ptchd3Q0EEE2 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC13.52□□□□□ -0.25
Ptchd3Q0EEE2 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Ptchd3Q0EEE2 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Ptchd3Q0EEE2 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ptchd3Q0EEE2 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC13.51□□□□□ -0.25
Ptchd3Q0EEE2 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ptchd3Q0EEE2 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ptchd3Q0EEE2 AC154262.2-201ENSMUST00000224310 2293 ntBASIC13.51□□□□□ -0.25
Ptchd3Q0EEE2 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ptchd3Q0EEE2 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Ptchd3Q0EEE2 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC13.51□□□□□ -0.25
Ptchd3Q0EEE2 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ptchd3Q0EEE2 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ptchd3Q0EEE2 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ptchd3Q0EEE2 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ptchd3Q0EEE2 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC13.51□□□□□ -0.25
Ptchd3Q0EEE2 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Ptchd3Q0EEE2 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ptchd3Q0EEE2 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ptchd3Q0EEE2 Gm12892-201ENSMUST00000117367 1146 ntBASIC13.51□□□□□ -0.25
Ptchd3Q0EEE2 Gm14494-201ENSMUST00000118786 435 ntBASIC13.51□□□□□ -0.25
Ptchd3Q0EEE2 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms