Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Gm37028-201ENSMUST00000194276 107 ntBASIC21.01■□□□□ 0.95
Col17a1Q07563 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC21.01■□□□□ 0.95
Col17a1Q07563 AC154184.3-201ENSMUST00000225620 1090 ntBASIC21.01■□□□□ 0.95
Col17a1Q07563 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Col17a1Q07563 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Col17a1Q07563 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Col17a1Q07563 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC21.01■□□□□ 0.95
Col17a1Q07563 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Col17a1Q07563 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Col17a1Q07563 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Col17a1Q07563 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Col17a1Q07563 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Col17a1Q07563 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Col17a1Q07563 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC21.01■□□□□ 0.95
Col17a1Q07563 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC21.01■□□□□ 0.95
Col17a1Q07563 Gm13875-201ENSMUST00000120162 282 ntBASIC21.01■□□□□ 0.95
Col17a1Q07563 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC21.01■□□□□ 0.95
Col17a1Q07563 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC21.01■□□□□ 0.95
Col17a1Q07563 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC21.01■□□□□ 0.95
Col17a1Q07563 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Col17a1Q07563 AC173210.1-201ENSMUST00000222341 1131 ntBASIC21.01■□□□□ 0.95
Col17a1Q07563 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Col17a1Q07563 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Col17a1Q07563 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Col17a1Q07563 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Col17a1Q07563 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Col17a1Q07563 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Col17a1Q07563 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC21■□□□□ 0.95
Col17a1Q07563 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC21■□□□□ 0.95
Col17a1Q07563 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Col17a1Q07563 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
Col17a1Q07563 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Col17a1Q07563 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC21■□□□□ 0.95
Col17a1Q07563 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
Col17a1Q07563 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC21■□□□□ 0.95
Col17a1Q07563 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Col17a1Q07563 Gm44651-201ENSMUST00000207343 372 ntBASIC21■□□□□ 0.95
Col17a1Q07563 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC21■□□□□ 0.95
Col17a1Q07563 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC21■□□□□ 0.95
Col17a1Q07563 AC154290.1-201ENSMUST00000223786 1240 ntBASIC21■□□□□ 0.95
Col17a1Q07563 AC069562.3-201ENSMUST00000225387 587 ntBASIC21■□□□□ 0.95
Col17a1Q07563 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Col17a1Q07563 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Col17a1Q07563 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC21■□□□□ 0.95
Col17a1Q07563 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Col17a1Q07563 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC21■□□□□ 0.95
Col17a1Q07563 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Col17a1Q07563 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC21■□□□□ 0.95
Col17a1Q07563 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Col17a1Q07563 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Col17a1Q07563 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Col17a1Q07563 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Col17a1Q07563 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Col17a1Q07563 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Col17a1Q07563 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Col17a1Q07563 Gm43423-201ENSMUST00000198390 2094 ntBASIC20.99■□□□□ 0.95
Col17a1Q07563 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC20.99■□□□□ 0.95
Col17a1Q07563 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Col17a1Q07563 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC20.99■□□□□ 0.95
Col17a1Q07563 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Col17a1Q07563 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Col17a1Q07563 Gm6159-201ENSMUST00000191249 1724 ntBASIC20.99■□□□□ 0.95
Col17a1Q07563 Gm16202-201ENSMUST00000117532 544 ntBASIC20.99■□□□□ 0.95
Col17a1Q07563 Gm13278-201ENSMUST00000177771 549 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Col17a1Q07563 Gm13275-201ENSMUST00000178347 549 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Col17a1Q07563 Gm13277-201ENSMUST00000178480 549 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Col17a1Q07563 Gm13279-201ENSMUST00000178602 549 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Col17a1Q07563 Gm13289-201ENSMUST00000179158 549 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Col17a1Q07563 Gm13276-201ENSMUST00000179372 549 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Col17a1Q07563 Gm13287-201ENSMUST00000179490 549 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Col17a1Q07563 Gm5732-201ENSMUST00000182596 1007 ntBASIC20.99■□□□□ 0.95
Col17a1Q07563 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC20.99■□□□□ 0.95
Col17a1Q07563 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Col17a1Q07563 Gm43275-201ENSMUST00000202053 1020 ntBASIC20.99■□□□□ 0.95
Col17a1Q07563 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC20.99■□□□□ 0.95
Col17a1Q07563 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC20.99■□□□□ 0.95
Col17a1Q07563 Nat8f6-201ENSMUST00000087656 925 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Col17a1Q07563 Gm7551-201ENSMUST00000089593 1074 ntBASIC20.99■□□□□ 0.95
Col17a1Q07563 Gm13271-201ENSMUST00000094992 549 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Col17a1Q07563 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Col17a1Q07563 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Col17a1Q07563 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Col17a1Q07563 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Col17a1Q07563 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC20.98■□□□□ 0.95
Col17a1Q07563 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Col17a1Q07563 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Col17a1Q07563 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
Col17a1Q07563 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Col17a1Q07563 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Col17a1Q07563 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Col17a1Q07563 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Col17a1Q07563 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Col17a1Q07563 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Col17a1Q07563 Gm13296-201ENSMUST00000117854 997 ntBASIC20.98■□□□□ 0.95
Col17a1Q07563 Gm6506-201ENSMUST00000119775 1136 ntBASIC20.98■□□□□ 0.95
Col17a1Q07563 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC20.98■□□□□ 0.95
Col17a1Q07563 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Col17a1Q07563 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC20.98■□□□□ 0.95
Col17a1Q07563 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC20.98■□□□□ 0.95
Col17a1Q07563 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms