Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Sox4Q06831 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox4Q06831 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox4Q06831 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Sox4Q06831 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Sox4Q06831 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Sox4Q06831 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Sox4Q06831 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Sox4Q06831 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox4Q06831 Gm3365-201ENSMUST00000216296 1480 ntBASIC13.75□□□□□ -0.21
Sox4Q06831 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox4Q06831 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox4Q06831 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Sox4Q06831 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC13.75□□□□□ -0.21
Sox4Q06831 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox4Q06831 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox4Q06831 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC13.75□□□□□ -0.21
Sox4Q06831 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox4Q06831 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Sox4Q06831 Gm10766-202ENSMUST00000194123 606 ntBASIC13.75□□□□□ -0.21
Sox4Q06831 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Sox4Q06831 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Sox4Q06831 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox4Q06831 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox4Q06831 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox4Q06831 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox4Q06831 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox4Q06831 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox4Q06831 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Sox4Q06831 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Sox4Q06831 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox4Q06831 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox4Q06831 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Sox4Q06831 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox4Q06831 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox4Q06831 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox4Q06831 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox4Q06831 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox4Q06831 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox4Q06831 Syt7-205ENSMUST00000224135 1557 ntBASIC13.75□□□□□ -0.21
Sox4Q06831 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Sox4Q06831 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Sox4Q06831 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox4Q06831 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Sox4Q06831 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox4Q06831 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox4Q06831 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox4Q06831 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Sox4Q06831 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Sox4Q06831 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC13.74□□□□□ -0.21
Sox4Q06831 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Sox4Q06831 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox4Q06831 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox4Q06831 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Sox4Q06831 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Sox4Q06831 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox4Q06831 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox4Q06831 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox4Q06831 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Sox4Q06831 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox4Q06831 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox4Q06831 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Sox4Q06831 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC13.74□□□□□ -0.21
Sox4Q06831 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox4Q06831 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC13.74□□□□□ -0.21
Sox4Q06831 Gm5866-201ENSMUST00000177881 973 ntBASIC13.74□□□□□ -0.21
Sox4Q06831 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC13.74□□□□□ -0.21
Sox4Q06831 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC13.74□□□□□ -0.21
Sox4Q06831 Gm6218-201ENSMUST00000219812 628 ntBASIC13.74□□□□□ -0.21
Sox4Q06831 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Sox4Q06831 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Sox4Q06831 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Sox4Q06831 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC13.74□□□□□ -0.21
Sox4Q06831 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Sox4Q06831 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox4Q06831 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC13.74□□□□□ -0.21
Sox4Q06831 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox4Q06831 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox4Q06831 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Sox4Q06831 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox4Q06831 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox4Q06831 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox4Q06831 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
Sox4Q06831 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox4Q06831 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox4Q06831 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox4Q06831 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox4Q06831 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox4Q06831 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC13.73□□□□□ -0.21
Sox4Q06831 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC13.73□□□□□ -0.21
Sox4Q06831 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC13.73□□□□□ -0.21
Sox4Q06831 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox4Q06831 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox4Q06831 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Sox4Q06831 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox4Q06831 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Sox4Q06831 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC13.73□□□□□ -0.21
Sox4Q06831 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Sox4Q06831 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Sox4Q06831 Gm4804-201ENSMUST00000182234 999 ntBASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms