Protein–RNA interactions for Protein: Q01853

Vcp, Transitional endoplasmic reticulum ATPase, mousemouse

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcpQ01853 Gm22189-201ENSMUST00000103822 86 ntBASIC14.93□□□□□ -0.02
VcpQ01853 Gm4875-201ENSMUST00000118257 786 ntBASIC14.93□□□□□ -0.02
VcpQ01853 Gm11918-201ENSMUST00000121660 179 ntBASIC14.93□□□□□ -0.02
VcpQ01853 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VcpQ01853 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
VcpQ01853 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC14.93□□□□□ -0.02
VcpQ01853 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC14.93□□□□□ -0.02
VcpQ01853 Gm9182-201ENSMUST00000217829 639 ntBASIC14.93□□□□□ -0.02
VcpQ01853 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
VcpQ01853 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
VcpQ01853 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
VcpQ01853 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VcpQ01853 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
VcpQ01853 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
VcpQ01853 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
VcpQ01853 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
VcpQ01853 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VcpQ01853 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
VcpQ01853 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
VcpQ01853 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
VcpQ01853 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VcpQ01853 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
VcpQ01853 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
VcpQ01853 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
VcpQ01853 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
VcpQ01853 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
VcpQ01853 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VcpQ01853 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
VcpQ01853 Gm28182-201ENSMUST00000188354 2477 ntBASIC14.92□□□□□ -0.02
VcpQ01853 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
VcpQ01853 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
VcpQ01853 AC166574.6-201ENSMUST00000227889 1806 ntBASIC14.92□□□□□ -0.02
VcpQ01853 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
VcpQ01853 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
VcpQ01853 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC14.92□□□□□ -0.02
VcpQ01853 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VcpQ01853 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
VcpQ01853 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VcpQ01853 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
VcpQ01853 Cd63-ps-201ENSMUST00000145417 875 ntBASIC14.92□□□□□ -0.02
VcpQ01853 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC14.92□□□□□ -0.02
VcpQ01853 Gm37917-201ENSMUST00000194711 392 ntBASIC14.92□□□□□ -0.02
VcpQ01853 AC166349.1-201ENSMUST00000220866 695 ntBASIC14.92□□□□□ -0.02
VcpQ01853 Shd-206ENSMUST00000225145 998 ntBASIC14.92□□□□□ -0.02
VcpQ01853 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
VcpQ01853 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
VcpQ01853 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
VcpQ01853 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
VcpQ01853 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VcpQ01853 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
VcpQ01853 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VcpQ01853 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
VcpQ01853 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
VcpQ01853 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VcpQ01853 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
VcpQ01853 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC14.92□□□□□ -0.02
VcpQ01853 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC14.92□□□□□ -0.02
VcpQ01853 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
VcpQ01853 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC14.92□□□□□ -0.02
VcpQ01853 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VcpQ01853 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
VcpQ01853 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VcpQ01853 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.91□□□□□ -0.02
VcpQ01853 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
VcpQ01853 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
VcpQ01853 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VcpQ01853 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VcpQ01853 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VcpQ01853 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
VcpQ01853 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VcpQ01853 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
VcpQ01853 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
VcpQ01853 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VcpQ01853 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
VcpQ01853 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
VcpQ01853 Gm24543-201ENSMUST00000103867 82 ntBASIC14.91□□□□□ -0.02
VcpQ01853 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC14.91□□□□□ -0.02
VcpQ01853 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
VcpQ01853 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VcpQ01853 Gm37230-201ENSMUST00000194491 818 ntBASIC14.91□□□□□ -0.02
VcpQ01853 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
VcpQ01853 Gm45331-201ENSMUST00000209868 554 ntBASIC14.91□□□□□ -0.02
VcpQ01853 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VcpQ01853 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VcpQ01853 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
VcpQ01853 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VcpQ01853 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VcpQ01853 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
VcpQ01853 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
VcpQ01853 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
VcpQ01853 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
VcpQ01853 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VcpQ01853 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VcpQ01853 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
VcpQ01853 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
VcpQ01853 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VcpQ01853 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VcpQ01853 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
VcpQ01853 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
VcpQ01853 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms