Protein–RNA interactions for Protein: Q00420

Gabpb1, GA-binding protein subunit beta-1, mousemouse

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabpb1Q00420 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gabpb1Q00420 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gabpb1Q00420 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gabpb1Q00420 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Gabpb1Q00420 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gabpb1Q00420 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Gabpb1Q00420 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC14.22□□□□□ -0.13
Gabpb1Q00420 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC14.22□□□□□ -0.13
Gabpb1Q00420 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC14.22□□□□□ -0.13
Gabpb1Q00420 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.22□□□□□ -0.13
Gabpb1Q00420 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gabpb1Q00420 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Gabpb1Q00420 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gabpb1Q00420 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gabpb1Q00420 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gabpb1Q00420 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gabpb1Q00420 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Gabpb1Q00420 Gm7336-201ENSMUST00000107041 1232 ntBASIC14.22□□□□□ -0.13
Gabpb1Q00420 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Gabpb1Q00420 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gabpb1Q00420 Gm8410-201ENSMUST00000117225 605 ntBASIC14.22□□□□□ -0.13
Gabpb1Q00420 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gabpb1Q00420 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC14.22□□□□□ -0.13
Gabpb1Q00420 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC14.22□□□□□ -0.13
Gabpb1Q00420 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC14.22□□□□□ -0.13
Gabpb1Q00420 Gm6916-202ENSMUST00000205523 195 ntBASIC14.22□□□□□ -0.13
Gabpb1Q00420 AC156016.3-201ENSMUST00000228623 344 ntBASIC14.22□□□□□ -0.13
Gabpb1Q00420 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gabpb1Q00420 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Gabpb1Q00420 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Gabpb1Q00420 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Gabpb1Q00420 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gabpb1Q00420 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gabpb1Q00420 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gabpb1Q00420 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Gabpb1Q00420 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Gabpb1Q00420 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gabpb1Q00420 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Gabpb1Q00420 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Gabpb1Q00420 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Gabpb1Q00420 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Gabpb1Q00420 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Gabpb1Q00420 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gabpb1Q00420 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gabpb1Q00420 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gabpb1Q00420 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Gabpb1Q00420 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gabpb1Q00420 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gabpb1Q00420 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gabpb1Q00420 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gabpb1Q00420 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Gabpb1Q00420 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gabpb1Q00420 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
Gabpb1Q00420 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Gabpb1Q00420 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Gabpb1Q00420 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
Gabpb1Q00420 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gabpb1Q00420 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Gabpb1Q00420 Gm25144-201ENSMUST00000179561 110 ntBASIC14.21□□□□□ -0.13
Gabpb1Q00420 Gm25352-201ENSMUST00000179815 110 ntBASIC14.21□□□□□ -0.13
Gabpb1Q00420 Gm27622-201ENSMUST00000183779 60 ntBASIC14.21□□□□□ -0.13
Gabpb1Q00420 Gm29741-201ENSMUST00000192667 421 ntBASIC14.21□□□□□ -0.13
Gabpb1Q00420 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Gabpb1Q00420 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC14.21□□□□□ -0.13
Gabpb1Q00420 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC14.21□□□□□ -0.13
Gabpb1Q00420 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gabpb1Q00420 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Gabpb1Q00420 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gabpb1Q00420 Gm42872-201ENSMUST00000200026 1967 ntBASIC14.21□□□□□ -0.13
Gabpb1Q00420 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gabpb1Q00420 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Gabpb1Q00420 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Gabpb1Q00420 AC114543.1-201ENSMUST00000226451 1558 ntBASIC14.21□□□□□ -0.14
Gabpb1Q00420 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Gabpb1Q00420 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Gabpb1Q00420 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Gabpb1Q00420 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Gabpb1Q00420 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gabpb1Q00420 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gabpb1Q00420 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC14.2□□□□□ -0.14
Gabpb1Q00420 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gabpb1Q00420 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14.2□□□□□ -0.14
Gabpb1Q00420 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Gabpb1Q00420 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Gabpb1Q00420 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Gabpb1Q00420 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gabpb1Q00420 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Gabpb1Q00420 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC14.2□□□□□ -0.14
Gabpb1Q00420 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gabpb1Q00420 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Gabpb1Q00420 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Gabpb1Q00420 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC14.2□□□□□ -0.14
Gabpb1Q00420 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Gabpb1Q00420 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Gabpb1Q00420 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gabpb1Q00420 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Gabpb1Q00420 Gm27430-201ENSMUST00000184585 107 ntBASIC14.2□□□□□ -0.14
Gabpb1Q00420 Gm33320-201ENSMUST00000192232 530 ntBASIC14.2□□□□□ -0.14
Gabpb1Q00420 Gm44333-201ENSMUST00000197168 107 ntBASIC14.2□□□□□ -0.14
Gabpb1Q00420 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms