Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
PrkdcP97313 Gm8325-201ENSMUST00000099086 453 ntBASIC9.29□□□□□ -0.92
PrkdcP97313 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
PrkdcP97313 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
PrkdcP97313 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
PrkdcP97313 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
PrkdcP97313 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
PrkdcP97313 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
PrkdcP97313 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
PrkdcP97313 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
PrkdcP97313 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
PrkdcP97313 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
PrkdcP97313 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
PrkdcP97313 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
PrkdcP97313 Gm2546-201ENSMUST00000182630 991 ntBASIC9.29□□□□□ -0.92
PrkdcP97313 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC9.29□□□□□ -0.92
PrkdcP97313 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC9.29□□□□□ -0.92
PrkdcP97313 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC9.29□□□□□ -0.92
PrkdcP97313 Gm31256-201ENSMUST00000194705 506 ntBASIC9.29□□□□□ -0.92
PrkdcP97313 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
PrkdcP97313 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
PrkdcP97313 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
PrkdcP97313 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
PrkdcP97313 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
PrkdcP97313 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC9.29□□□□□ -0.92
PrkdcP97313 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
PrkdcP97313 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
PrkdcP97313 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC9.29□□□□□ -0.92
PrkdcP97313 Gm12165-201ENSMUST00000117047 342 ntBASIC9.29□□□□□ -0.92
PrkdcP97313 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC9.29□□□□□ -0.92
PrkdcP97313 AC154276.3-201ENSMUST00000227643 998 ntBASIC9.29□□□□□ -0.92
PrkdcP97313 AC131997.1-201ENSMUST00000228611 1229 ntBASIC9.29□□□□□ -0.92
PrkdcP97313 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
PrkdcP97313 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
PrkdcP97313 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
PrkdcP97313 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
PrkdcP97313 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
PrkdcP97313 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC9.28□□□□□ -0.92
PrkdcP97313 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
PrkdcP97313 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
PrkdcP97313 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
PrkdcP97313 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
PrkdcP97313 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
PrkdcP97313 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
PrkdcP97313 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
PrkdcP97313 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC9.28□□□□□ -0.92
PrkdcP97313 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
PrkdcP97313 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
PrkdcP97313 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
PrkdcP97313 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
PrkdcP97313 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
PrkdcP97313 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
PrkdcP97313 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
PrkdcP97313 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
PrkdcP97313 Gm5070-201ENSMUST00000177599 862 ntBASIC9.28□□□□□ -0.92
PrkdcP97313 Gm9211-201ENSMUST00000182882 975 ntBASIC9.28□□□□□ -0.92
PrkdcP97313 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
PrkdcP97313 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC9.28□□□□□ -0.92
PrkdcP97313 Gm5950-201ENSMUST00000213337 772 ntBASIC9.28□□□□□ -0.92
PrkdcP97313 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
PrkdcP97313 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC9.28□□□□□ -0.92
PrkdcP97313 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
PrkdcP97313 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
PrkdcP97313 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
PrkdcP97313 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC9.28□□□□□ -0.92
PrkdcP97313 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
PrkdcP97313 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
PrkdcP97313 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
PrkdcP97313 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC9.28□□□□□ -0.92
PrkdcP97313 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC9.28□□□□□ -0.92
PrkdcP97313 Gm6458-201ENSMUST00000211573 635 ntBASIC9.28□□□□□ -0.92
PrkdcP97313 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
PrkdcP97313 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
PrkdcP97313 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC9.27□□□□□ -0.92
PrkdcP97313 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.92
PrkdcP97313 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
PrkdcP97313 Gm43908-201ENSMUST00000205074 1472 ntBASIC9.27□□□□□ -0.92
PrkdcP97313 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.92
PrkdcP97313 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.92
PrkdcP97313 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
PrkdcP97313 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
PrkdcP97313 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
PrkdcP97313 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC9.27□□□□□ -0.93
PrkdcP97313 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
PrkdcP97313 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
PrkdcP97313 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC9.27□□□□□ -0.93
PrkdcP97313 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
PrkdcP97313 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.93
PrkdcP97313 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
PrkdcP97313 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC9.27□□□□□ -0.93
PrkdcP97313 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
PrkdcP97313 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
PrkdcP97313 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
PrkdcP97313 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
PrkdcP97313 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
PrkdcP97313 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC9.27□□□□□ -0.93
PrkdcP97313 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
PrkdcP97313 Gm19166-201ENSMUST00000196041 1063 ntBASIC9.27□□□□□ -0.93
PrkdcP97313 Gm44405-201ENSMUST00000198952 126 ntBASIC9.27□□□□□ -0.93
PrkdcP97313 Gm43916-201ENSMUST00000205062 967 ntBASIC9.27□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms