Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC14.42□□□□□ -0.1
Trim43bP86448 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Trim43bP86448 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC14.42□□□□□ -0.1
Trim43bP86448 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Trim43bP86448 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trim43bP86448 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim43bP86448 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim43bP86448 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim43bP86448 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim43bP86448 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Trim43bP86448 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim43bP86448 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trim43bP86448 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim43bP86448 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim43bP86448 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim43bP86448 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim43bP86448 Gm44065-201ENSMUST00000203184 3527 ntBASIC14.41□□□□□ -0.1
Trim43bP86448 Gm43474-201ENSMUST00000196415 774 ntBASIC14.41□□□□□ -0.1
Trim43bP86448 Gm43125-201ENSMUST00000201724 730 ntBASIC14.41□□□□□ -0.1
Trim43bP86448 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC14.41□□□□□ -0.1
Trim43bP86448 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC14.41□□□□□ -0.1
Trim43bP86448 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim43bP86448 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC14.41□□□□□ -0.1
Trim43bP86448 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim43bP86448 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim43bP86448 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trim43bP86448 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC14.41□□□□□ -0.1
Trim43bP86448 Grk6-205ENSMUST00000224653 2976 ntBASIC14.41□□□□□ -0.1
Trim43bP86448 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim43bP86448 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trim43bP86448 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim43bP86448 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim43bP86448 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC14.41□□□□□ -0.1
Trim43bP86448 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim43bP86448 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC14.41□□□□□ -0.1
Trim43bP86448 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim43bP86448 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Trim43bP86448 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim43bP86448 Gm13233-201ENSMUST00000118760 1443 ntBASIC14.41□□□□□ -0.1
Trim43bP86448 Gm13244-201ENSMUST00000118855 1446 ntBASIC14.41□□□□□ -0.1
Trim43bP86448 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC14.41□□□□□ -0.1
Trim43bP86448 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim43bP86448 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim43bP86448 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim43bP86448 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim43bP86448 Gm42829-201ENSMUST00000198417 2585 ntBASIC14.4□□□□□ -0.1
Trim43bP86448 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim43bP86448 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Trim43bP86448 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Trim43bP86448 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim43bP86448 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim43bP86448 Gm15889-202ENSMUST00000212669 2443 ntBASIC14.4□□□□□ -0.1
Trim43bP86448 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim43bP86448 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim43bP86448 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim43bP86448 Gm22065-201ENSMUST00000103753 110 ntBASIC14.4□□□□□ -0.1
Trim43bP86448 Gm22066-201ENSMUST00000103761 110 ntBASIC14.4□□□□□ -0.1
Trim43bP86448 Gm24932-201ENSMUST00000103763 110 ntBASIC14.4□□□□□ -0.1
Trim43bP86448 Gm24115-201ENSMUST00000103799 110 ntBASIC14.4□□□□□ -0.1
Trim43bP86448 Gm22190-201ENSMUST00000103827 110 ntBASIC14.4□□□□□ -0.1
Trim43bP86448 Gm22191-201ENSMUST00000103831 110 ntBASIC14.4□□□□□ -0.1
Trim43bP86448 Gm24721-201ENSMUST00000103849 110 ntBASIC14.4□□□□□ -0.1
Trim43bP86448 Gm28018-201ENSMUST00000103869 110 ntBASIC14.4□□□□□ -0.1
Trim43bP86448 Gm26399-201ENSMUST00000103937 110 ntBASIC14.4□□□□□ -0.1
Trim43bP86448 Gm6973-201ENSMUST00000117080 721 ntBASIC14.4□□□□□ -0.1
Trim43bP86448 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC14.4□□□□□ -0.1
Trim43bP86448 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trim43bP86448 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC14.4□□□□□ -0.1
Trim43bP86448 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Trim43bP86448 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim43bP86448 Gm25349-201ENSMUST00000177728 110 ntBASIC14.4□□□□□ -0.1
Trim43bP86448 Gm23616-201ENSMUST00000177797 110 ntBASIC14.4□□□□□ -0.1
Trim43bP86448 Gm25871-201ENSMUST00000177816 110 ntBASIC14.4□□□□□ -0.1
Trim43bP86448 Gm24752-201ENSMUST00000178240 110 ntBASIC14.4□□□□□ -0.1
Trim43bP86448 Gm24496-201ENSMUST00000178287 110 ntBASIC14.4□□□□□ -0.1
Trim43bP86448 Gm25649-201ENSMUST00000178476 110 ntBASIC14.4□□□□□ -0.1
Trim43bP86448 Gm25548-201ENSMUST00000178681 110 ntBASIC14.4□□□□□ -0.1
Trim43bP86448 Gm23147-201ENSMUST00000178841 110 ntBASIC14.4□□□□□ -0.1
Trim43bP86448 Gm26095-201ENSMUST00000179270 110 ntBASIC14.4□□□□□ -0.1
Trim43bP86448 Gm22171-201ENSMUST00000179283 110 ntBASIC14.4□□□□□ -0.1
Trim43bP86448 Gm23936-201ENSMUST00000179354 110 ntBASIC14.4□□□□□ -0.1
Trim43bP86448 Gm22619-201ENSMUST00000179516 110 ntBASIC14.4□□□□□ -0.1
Trim43bP86448 Gm25255-201ENSMUST00000179579 110 ntBASIC14.4□□□□□ -0.1
Trim43bP86448 Gm24755-201ENSMUST00000179691 110 ntBASIC14.4□□□□□ -0.1
Trim43bP86448 Gm26506-201ENSMUST00000179692 110 ntBASIC14.4□□□□□ -0.1
Trim43bP86448 Gm25086-201ENSMUST00000179931 110 ntBASIC14.4□□□□□ -0.1
Trim43bP86448 Gm23243-201ENSMUST00000180047 110 ntBASIC14.4□□□□□ -0.1
Trim43bP86448 Gm24659-201ENSMUST00000180212 110 ntBASIC14.4□□□□□ -0.1
Trim43bP86448 Gm24169-201ENSMUST00000180244 110 ntBASIC14.4□□□□□ -0.1
Trim43bP86448 Gm23689-201ENSMUST00000180354 110 ntBASIC14.4□□□□□ -0.1
Trim43bP86448 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC14.4□□□□□ -0.1
Trim43bP86448 Gm27359-201ENSMUST00000184153 110 ntBASIC14.4□□□□□ -0.1
Trim43bP86448 Gm27785-201ENSMUST00000184268 110 ntBASIC14.4□□□□□ -0.1
Trim43bP86448 Gm27466-201ENSMUST00000184396 110 ntBASIC14.4□□□□□ -0.1
Trim43bP86448 Gm27703-201ENSMUST00000184836 110 ntBASIC14.4□□□□□ -0.1
Trim43bP86448 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim43bP86448 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim43bP86448 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim43bP86448 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Trim43bP86448 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms