Protein–RNA interactions for Protein: P70340

Smad1, Mothers against decapentaplegic homolog 1, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad1P70340 Gm13823-201ENSMUST00000119930 345 ntBASIC14.47□□□□□ -0.09
Smad1P70340 Gm12151-201ENSMUST00000121374 290 ntBASIC14.47□□□□□ -0.09
Smad1P70340 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Smad1P70340 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Smad1P70340 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC14.47□□□□□ -0.09
Smad1P70340 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Smad1P70340 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Smad1P70340 Hist1h2al-201ENSMUST00000091708 339 ntBASIC14.47□□□□□ -0.09
Smad1P70340 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Smad1P70340 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Smad1P70340 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Smad1P70340 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Smad1P70340 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Smad1P70340 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Smad1P70340 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Smad1P70340 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Smad1P70340 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Smad1P70340 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Smad1P70340 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Smad1P70340 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC14.47□□□□□ -0.09
Smad1P70340 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC14.46□□□□□ -0.09
Smad1P70340 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Smad1P70340 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Smad1P70340 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Smad1P70340 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Smad1P70340 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Smad1P70340 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Smad1P70340 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Smad1P70340 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Smad1P70340 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC14.46□□□□□ -0.09
Smad1P70340 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
Smad1P70340 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Smad1P70340 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC14.46□□□□□ -0.09
Smad1P70340 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Smad1P70340 Gm27920-201ENSMUST00000183953 96 ntBASIC14.46□□□□□ -0.09
Smad1P70340 Mir8102-201ENSMUST00000184148 139 ntBASIC14.46□□□□□ -0.09
Smad1P70340 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC14.46□□□□□ -0.09
Smad1P70340 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Smad1P70340 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Smad1P70340 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Smad1P70340 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Smad1P70340 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Smad1P70340 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Smad1P70340 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Smad1P70340 Gm45630-201ENSMUST00000210243 1911 ntBASIC14.46□□□□□ -0.09
Smad1P70340 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Smad1P70340 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Smad1P70340 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Smad1P70340 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Smad1P70340 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Smad1P70340 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Smad1P70340 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Smad1P70340 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smad1P70340 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smad1P70340 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Smad1P70340 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smad1P70340 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Smad1P70340 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smad1P70340 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smad1P70340 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smad1P70340 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Smad1P70340 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smad1P70340 Gm5479-201ENSMUST00000160578 435 ntBASIC14.45□□□□□ -0.1
Smad1P70340 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Smad1P70340 Gm27618-201ENSMUST00000183671 60 ntBASIC14.45□□□□□ -0.1
Smad1P70340 Gm37277-201ENSMUST00000194052 1111 ntBASIC14.45□□□□□ -0.1
Smad1P70340 AC155729.1-201ENSMUST00000227758 544 ntBASIC14.45□□□□□ -0.1
Smad1P70340 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smad1P70340 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Smad1P70340 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smad1P70340 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC14.45□□□□□ -0.1
Smad1P70340 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smad1P70340 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smad1P70340 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Smad1P70340 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smad1P70340 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
Smad1P70340 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Smad1P70340 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smad1P70340 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Smad1P70340 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smad1P70340 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smad1P70340 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC14.44□□□□□ -0.1
Smad1P70340 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Smad1P70340 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smad1P70340 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smad1P70340 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smad1P70340 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smad1P70340 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC14.44□□□□□ -0.1
Smad1P70340 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Smad1P70340 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
Smad1P70340 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smad1P70340 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Smad1P70340 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smad1P70340 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smad1P70340 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Smad1P70340 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC14.44□□□□□ -0.1
Smad1P70340 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Smad1P70340 Gm6944-201ENSMUST00000182449 1006 ntBASIC14.44□□□□□ -0.1
Smad1P70340 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Smad1P70340 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms