Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pdlim4P70271 Gm24543-201ENSMUST00000103867 82 ntBASIC11.68□□□□□ -0.54
Pdlim4P70271 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC11.68□□□□□ -0.54
Pdlim4P70271 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Pdlim4P70271 Gm25144-201ENSMUST00000179561 110 ntBASIC11.68□□□□□ -0.54
Pdlim4P70271 Gm25352-201ENSMUST00000179815 110 ntBASIC11.68□□□□□ -0.54
Pdlim4P70271 Gm27622-201ENSMUST00000183779 60 ntBASIC11.68□□□□□ -0.54
Pdlim4P70271 Gm27631-201ENSMUST00000184163 466 ntBASIC11.68□□□□□ -0.54
Pdlim4P70271 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pdlim4P70271 AA619741-201ENSMUST00000195095 646 ntBASIC11.68□□□□□ -0.54
Pdlim4P70271 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Pdlim4P70271 Gm45453-201ENSMUST00000211758 853 ntBASIC11.68□□□□□ -0.54
Pdlim4P70271 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Pdlim4P70271 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Pdlim4P70271 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC11.68□□□□□ -0.54
Pdlim4P70271 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pdlim4P70271 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Pdlim4P70271 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pdlim4P70271 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pdlim4P70271 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pdlim4P70271 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Pdlim4P70271 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pdlim4P70271 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Pdlim4P70271 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Pdlim4P70271 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pdlim4P70271 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC11.68□□□□□ -0.54
Pdlim4P70271 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Pdlim4P70271 Mypopos-202ENSMUST00000205975 2321 ntBASIC11.68□□□□□ -0.54
Pdlim4P70271 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Pdlim4P70271 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pdlim4P70271 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pdlim4P70271 Gm45751-201ENSMUST00000210185 1573 ntBASIC11.67□□□□□ -0.54
Pdlim4P70271 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pdlim4P70271 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pdlim4P70271 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
Pdlim4P70271 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pdlim4P70271 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Pdlim4P70271 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pdlim4P70271 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pdlim4P70271 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Pdlim4P70271 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pdlim4P70271 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pdlim4P70271 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pdlim4P70271 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC11.67□□□□□ -0.54
Pdlim4P70271 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Pdlim4P70271 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pdlim4P70271 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC11.67□□□□□ -0.54
Pdlim4P70271 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC11.67□□□□□ -0.54
Pdlim4P70271 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC11.67□□□□□ -0.54
Pdlim4P70271 AC121598.1-201ENSMUST00000228224 1019 ntBASIC11.67□□□□□ -0.54
Pdlim4P70271 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pdlim4P70271 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pdlim4P70271 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pdlim4P70271 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Pdlim4P70271 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pdlim4P70271 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Pdlim4P70271 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pdlim4P70271 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Pdlim4P70271 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Pdlim4P70271 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Pdlim4P70271 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Pdlim4P70271 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pdlim4P70271 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pdlim4P70271 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Pdlim4P70271 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pdlim4P70271 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pdlim4P70271 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Pdlim4P70271 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Pdlim4P70271 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pdlim4P70271 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pdlim4P70271 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pdlim4P70271 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC11.66□□□□□ -0.54
Pdlim4P70271 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pdlim4P70271 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pdlim4P70271 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Pdlim4P70271 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Pdlim4P70271 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pdlim4P70271 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC11.66□□□□□ -0.54
Pdlim4P70271 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pdlim4P70271 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC11.66□□□□□ -0.54
Pdlim4P70271 Gm12882-201ENSMUST00000121696 517 ntBASIC11.66□□□□□ -0.54
Pdlim4P70271 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Pdlim4P70271 Gm17837-201ENSMUST00000186435 985 ntBASIC11.66□□□□□ -0.54
Pdlim4P70271 Gm28630-201ENSMUST00000187806 498 ntBASIC11.66□□□□□ -0.54
Pdlim4P70271 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC11.66□□□□□ -0.54
Pdlim4P70271 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC11.66□□□□□ -0.54
Pdlim4P70271 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pdlim4P70271 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Pdlim4P70271 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pdlim4P70271 AC102291.3-201ENSMUST00000226566 405 ntBASIC11.66□□□□□ -0.54
Pdlim4P70271 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pdlim4P70271 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pdlim4P70271 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC11.66□□□□□ -0.54
Pdlim4P70271 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pdlim4P70271 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pdlim4P70271 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pdlim4P70271 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pdlim4P70271 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Pdlim4P70271 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pdlim4P70271 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms