Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lsm6P62313 Gm7336-201ENSMUST00000107041 1232 ntBASIC12.3□□□□□ -0.44
Lsm6P62313 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lsm6P62313 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Lsm6P62313 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC12.3□□□□□ -0.44
Lsm6P62313 Gm18027-201ENSMUST00000218947 619 ntBASIC12.3□□□□□ -0.44
Lsm6P62313 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lsm6P62313 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lsm6P62313 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lsm6P62313 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lsm6P62313 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Lsm6P62313 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Lsm6P62313 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lsm6P62313 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lsm6P62313 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lsm6P62313 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC12.29□□□□□ -0.44
Lsm6P62313 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Lsm6P62313 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Lsm6P62313 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lsm6P62313 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lsm6P62313 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Lsm6P62313 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lsm6P62313 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lsm6P62313 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lsm6P62313 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lsm6P62313 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Lsm6P62313 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Lsm6P62313 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lsm6P62313 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Lsm6P62313 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lsm6P62313 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lsm6P62313 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lsm6P62313 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lsm6P62313 Gm23935-201ENSMUST00000102303 57 ntBASIC12.29□□□□□ -0.44
Lsm6P62313 Gm24270-201ENSMUST00000102326 57 ntBASIC12.29□□□□□ -0.44
Lsm6P62313 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lsm6P62313 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Lsm6P62313 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Lsm6P62313 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC12.29□□□□□ -0.44
Lsm6P62313 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC12.29□□□□□ -0.44
Lsm6P62313 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Lsm6P62313 Gm24245-201ENSMUST00000157318 57 ntBASIC12.29□□□□□ -0.44
Lsm6P62313 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lsm6P62313 Gm25144-201ENSMUST00000179561 110 ntBASIC12.29□□□□□ -0.44
Lsm6P62313 Gm25352-201ENSMUST00000179815 110 ntBASIC12.29□□□□□ -0.44
Lsm6P62313 Gm43575-201ENSMUST00000196420 516 ntBASIC12.29□□□□□ -0.44
Lsm6P62313 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Lsm6P62313 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Lsm6P62313 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC12.29□□□□□ -0.44
Lsm6P62313 AC156016.3-201ENSMUST00000228623 344 ntBASIC12.29□□□□□ -0.44
Lsm6P62313 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lsm6P62313 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lsm6P62313 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Lsm6P62313 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lsm6P62313 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lsm6P62313 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Lsm6P62313 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Lsm6P62313 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lsm6P62313 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Lsm6P62313 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lsm6P62313 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lsm6P62313 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lsm6P62313 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lsm6P62313 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC12.29□□□□□ -0.44
Lsm6P62313 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lsm6P62313 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC12.29□□□□□ -0.44
Lsm6P62313 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Lsm6P62313 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC12.28□□□□□ -0.44
Lsm6P62313 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lsm6P62313 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Lsm6P62313 Gm38391-201ENSMUST00000191720 4069 ntBASIC12.28□□□□□ -0.44
Lsm6P62313 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lsm6P62313 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lsm6P62313 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lsm6P62313 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Lsm6P62313 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lsm6P62313 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lsm6P62313 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lsm6P62313 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lsm6P62313 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Lsm6P62313 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC12.28□□□□□ -0.44
Lsm6P62313 Gm8410-201ENSMUST00000117225 605 ntBASIC12.28□□□□□ -0.44
Lsm6P62313 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lsm6P62313 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC12.28□□□□□ -0.44
Lsm6P62313 Gm12428-201ENSMUST00000119844 727 ntBASIC12.28□□□□□ -0.44
Lsm6P62313 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC12.28□□□□□ -0.44
Lsm6P62313 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
Lsm6P62313 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Lsm6P62313 Gm27622-201ENSMUST00000183779 60 ntBASIC12.28□□□□□ -0.44
Lsm6P62313 Gm27430-201ENSMUST00000184585 107 ntBASIC12.28□□□□□ -0.44
Lsm6P62313 Gm44333-201ENSMUST00000197168 107 ntBASIC12.28□□□□□ -0.44
Lsm6P62313 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC12.28□□□□□ -0.44
Lsm6P62313 CT030704.2-201ENSMUST00000228887 494 ntBASIC12.28□□□□□ -0.44
Lsm6P62313 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Lsm6P62313 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Lsm6P62313 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Lsm6P62313 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lsm6P62313 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
Lsm6P62313 Gm45667-201ENSMUST00000210380 1316 ntBASIC12.28□□□□□ -0.44
Lsm6P62313 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms