Protein–RNA interactions for Protein: P56857

Cldn18, Claudin-18, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn18P56857 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn18P56857 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Cldn18P56857 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn18P56857 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Cldn18P56857 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC12.53□□□□□ -0.4
Cldn18P56857 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Cldn18P56857 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC12.53□□□□□ -0.4
Cldn18P56857 Gm3809-201ENSMUST00000180973 1006 ntBASIC12.53□□□□□ -0.4
Cldn18P56857 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn18P56857 Gm29667-201ENSMUST00000190817 490 ntBASIC12.53□□□□□ -0.4
Cldn18P56857 Ighv1-51-201ENSMUST00000192903 354 ntBASIC12.53□□□□□ -0.4
Cldn18P56857 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC12.53□□□□□ -0.4
Cldn18P56857 AC154846.1-201ENSMUST00000226278 862 ntBASIC12.53□□□□□ -0.4
Cldn18P56857 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC12.53□□□□□ -0.4
Cldn18P56857 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn18P56857 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn18P56857 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn18P56857 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn18P56857 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Cldn18P56857 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn18P56857 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC12.53□□□□□ -0.4
Cldn18P56857 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn18P56857 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Cldn18P56857 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn18P56857 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC12.53□□□□□ -0.4
Cldn18P56857 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn18P56857 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn18P56857 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn18P56857 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn18P56857 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn18P56857 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn18P56857 AC166574.6-201ENSMUST00000227889 1806 ntBASIC12.53□□□□□ -0.4
Cldn18P56857 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
Cldn18P56857 Gm42471-201ENSMUST00000201457 1865 ntBASIC12.53□□□□□ -0.4
Cldn18P56857 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn18P56857 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cldn18P56857 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC12.52□□□□□ -0.4
Cldn18P56857 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cldn18P56857 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cldn18P56857 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Cldn18P56857 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cldn18P56857 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.4
Cldn18P56857 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cldn18P56857 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cldn18P56857 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cldn18P56857 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cldn18P56857 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cldn18P56857 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cldn18P56857 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC12.52□□□□□ -0.4
Cldn18P56857 Gm37912-201ENSMUST00000191895 3076 ntBASIC12.52□□□□□ -0.4
Cldn18P56857 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cldn18P56857 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cldn18P56857 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cldn18P56857 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cldn18P56857 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cldn18P56857 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cldn18P56857 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC12.52□□□□□ -0.41
Cldn18P56857 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC12.52□□□□□ -0.41
Cldn18P56857 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cldn18P56857 Gm9522-201ENSMUST00000182394 926 ntBASIC12.52□□□□□ -0.41
Cldn18P56857 Gm2445-201ENSMUST00000182798 989 ntBASIC12.52□□□□□ -0.41
Cldn18P56857 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cldn18P56857 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cldn18P56857 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC12.52□□□□□ -0.41
Cldn18P56857 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cldn18P56857 Gm15889-202ENSMUST00000212669 2443 ntBASIC12.52□□□□□ -0.41
Cldn18P56857 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cldn18P56857 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cldn18P56857 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC12.52□□□□□ -0.41
Cldn18P56857 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cldn18P56857 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cldn18P56857 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cldn18P56857 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Cldn18P56857 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
Cldn18P56857 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cldn18P56857 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cldn18P56857 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cldn18P56857 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cldn18P56857 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cldn18P56857 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cldn18P56857 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cldn18P56857 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cldn18P56857 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cldn18P56857 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cldn18P56857 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cldn18P56857 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC12.51□□□□□ -0.41
Cldn18P56857 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cldn18P56857 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cldn18P56857 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cldn18P56857 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Cldn18P56857 Gm24694-201ENSMUST00000180054 110 ntBASIC12.51□□□□□ -0.41
Cldn18P56857 Gm27663-201ENSMUST00000184839 110 ntBASIC12.51□□□□□ -0.41
Cldn18P56857 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC12.51□□□□□ -0.41
Cldn18P56857 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cldn18P56857 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cldn18P56857 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cldn18P56857 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cldn18P56857 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC12.51□□□□□ -0.41
Cldn18P56857 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cldn18P56857 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms