Protein–RNA interactions for Protein: P56390

Cks2, Cyclin-dependent kinases regulatory subunit 2, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks2P56390 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Cks2P56390 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cks2P56390 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cks2P56390 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cks2P56390 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Cks2P56390 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cks2P56390 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cks2P56390 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cks2P56390 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cks2P56390 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cks2P56390 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC11.67□□□□□ -0.54
Cks2P56390 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cks2P56390 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cks2P56390 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC11.67□□□□□ -0.54
Cks2P56390 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC11.67□□□□□ -0.54
Cks2P56390 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cks2P56390 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC11.67□□□□□ -0.54
Cks2P56390 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC11.67□□□□□ -0.54
Cks2P56390 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC11.67□□□□□ -0.54
Cks2P56390 AC138767.1-201ENSMUST00000222661 415 ntBASIC11.67□□□□□ -0.54
Cks2P56390 AC154222.1-201ENSMUST00000223882 475 ntBASIC11.67□□□□□ -0.54
Cks2P56390 AC154572.2-201ENSMUST00000225105 997 ntBASIC11.67□□□□□ -0.54
Cks2P56390 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cks2P56390 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cks2P56390 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Cks2P56390 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cks2P56390 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cks2P56390 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cks2P56390 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cks2P56390 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cks2P56390 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC11.67□□□□□ -0.54
Cks2P56390 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cks2P56390 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Cks2P56390 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Cks2P56390 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cks2P56390 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cks2P56390 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cks2P56390 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Cks2P56390 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cks2P56390 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Cks2P56390 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cks2P56390 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cks2P56390 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cks2P56390 Nudt18-203ENSMUST00000228768 1578 ntBASIC11.67□□□□□ -0.54
Cks2P56390 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Cks2P56390 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC11.67□□□□□ -0.54
Cks2P56390 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cks2P56390 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cks2P56390 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cks2P56390 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Cks2P56390 Gm37844-201ENSMUST00000192473 4097 ntBASIC11.66□□□□□ -0.54
Cks2P56390 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cks2P56390 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cks2P56390 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cks2P56390 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Cks2P56390 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC11.66□□□□□ -0.54
Cks2P56390 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cks2P56390 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cks2P56390 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Cks2P56390 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Cks2P56390 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cks2P56390 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cks2P56390 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cks2P56390 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC11.66□□□□□ -0.54
Cks2P56390 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC11.66□□□□□ -0.54
Cks2P56390 Gm2651-201ENSMUST00000203560 838 ntBASIC11.66□□□□□ -0.54
Cks2P56390 AC164629.2-201ENSMUST00000217916 270 ntBASIC11.66□□□□□ -0.54
Cks2P56390 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC11.66□□□□□ -0.54
Cks2P56390 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cks2P56390 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cks2P56390 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Cks2P56390 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cks2P56390 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cks2P56390 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC11.66□□□□□ -0.54
Cks2P56390 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cks2P56390 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cks2P56390 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cks2P56390 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cks2P56390 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cks2P56390 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Cks2P56390 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cks2P56390 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cks2P56390 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cks2P56390 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cks2P56390 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cks2P56390 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Cks2P56390 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC11.65□□□□□ -0.54
Cks2P56390 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Cks2P56390 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cks2P56390 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Cks2P56390 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cks2P56390 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cks2P56390 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cks2P56390 CT025626.1-201ENSMUST00000223735 1455 ntBASIC11.65□□□□□ -0.54
Cks2P56390 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Cks2P56390 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Cks2P56390 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Cks2P56390 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Cks2P56390 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Cks2P56390 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms