Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cdh11P55288 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cdh11P55288 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.36
Cdh11P55288 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cdh11P55288 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cdh11P55288 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Cdh11P55288 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cdh11P55288 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cdh11P55288 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Cdh11P55288 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.36
Cdh11P55288 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cdh11P55288 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cdh11P55288 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cdh11P55288 Gm13464-201ENSMUST00000119418 935 ntBASIC12.77□□□□□ -0.37
Cdh11P55288 Gm11543-201ENSMUST00000120758 370 ntBASIC12.77□□□□□ -0.37
Cdh11P55288 Gm15593-201ENSMUST00000122085 1008 ntBASIC12.77□□□□□ -0.37
Cdh11P55288 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cdh11P55288 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cdh11P55288 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC12.77□□□□□ -0.37
Cdh11P55288 Gm24158-201ENSMUST00000175263 71 ntBASIC12.77□□□□□ -0.37
Cdh11P55288 Gm25948-201ENSMUST00000175334 112 ntBASIC12.77□□□□□ -0.37
Cdh11P55288 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cdh11P55288 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC12.77□□□□□ -0.37
Cdh11P55288 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Cdh11P55288 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC12.77□□□□□ -0.37
Cdh11P55288 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cdh11P55288 AC140397.2-201ENSMUST00000224213 834 ntBASIC12.77□□□□□ -0.37
Cdh11P55288 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cdh11P55288 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cdh11P55288 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cdh11P55288 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cdh11P55288 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cdh11P55288 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cdh11P55288 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cdh11P55288 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cdh11P55288 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cdh11P55288 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cdh11P55288 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cdh11P55288 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cdh11P55288 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC12.77□□□□□ -0.37
Cdh11P55288 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cdh11P55288 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cdh11P55288 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Cdh11P55288 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdh11P55288 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC12.76□□□□□ -0.37
Cdh11P55288 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdh11P55288 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Cdh11P55288 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC12.76□□□□□ -0.37
Cdh11P55288 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cdh11P55288 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdh11P55288 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdh11P55288 Gm5639-201ENSMUST00000122305 2403 ntBASIC12.76□□□□□ -0.37
Cdh11P55288 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Cdh11P55288 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdh11P55288 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdh11P55288 Gm6973-201ENSMUST00000117080 721 ntBASIC12.76□□□□□ -0.37
Cdh11P55288 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC12.76□□□□□ -0.37
Cdh11P55288 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cdh11P55288 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cdh11P55288 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC12.76□□□□□ -0.37
Cdh11P55288 AA543401-201ENSMUST00000164248 1269 ntBASIC12.76□□□□□ -0.37
Cdh11P55288 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdh11P55288 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdh11P55288 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdh11P55288 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdh11P55288 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC12.76□□□□□ -0.37
Cdh11P55288 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdh11P55288 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cdh11P55288 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdh11P55288 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdh11P55288 CT025626.1-201ENSMUST00000223735 1455 ntBASIC12.76□□□□□ -0.37
Cdh11P55288 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdh11P55288 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC12.76□□□□□ -0.37
Cdh11P55288 Gm8096-201ENSMUST00000209921 1591 ntBASIC12.76□□□□□ -0.37
Cdh11P55288 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdh11P55288 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdh11P55288 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC12.76□□□□□ -0.37
Cdh11P55288 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdh11P55288 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdh11P55288 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdh11P55288 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdh11P55288 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC12.75□□□□□ -0.37
Cdh11P55288 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Cdh11P55288 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cdh11P55288 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdh11P55288 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdh11P55288 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cdh11P55288 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdh11P55288 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdh11P55288 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Cdh11P55288 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cdh11P55288 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
Cdh11P55288 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC12.75□□□□□ -0.37
Cdh11P55288 Gm12626-201ENSMUST00000117339 1983 ntBASIC12.75□□□□□ -0.37
Cdh11P55288 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC12.75□□□□□ -0.37
Cdh11P55288 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdh11P55288 Gm12623-201ENSMUST00000119849 1983 ntBASIC12.75□□□□□ -0.37
Cdh11P55288 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cdh11P55288 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cdh11P55288 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms