Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdkn2bP55271 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Cdkn2bP55271 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdkn2bP55271 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Cdkn2bP55271 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.41□□□□□ -0.26
Cdkn2bP55271 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdkn2bP55271 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Cdkn2bP55271 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cdkn2bP55271 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cdkn2bP55271 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Cdkn2bP55271 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cdkn2bP55271 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Cdkn2bP55271 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cdkn2bP55271 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cdkn2bP55271 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Cdkn2bP55271 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cdkn2bP55271 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cdkn2bP55271 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cdkn2bP55271 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cdkn2bP55271 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cdkn2bP55271 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cdkn2bP55271 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cdkn2bP55271 Gm1401-201ENSMUST00000122048 772 ntBASIC13.4□□□□□ -0.26
Cdkn2bP55271 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC13.4□□□□□ -0.26
Cdkn2bP55271 AA619741-201ENSMUST00000195095 646 ntBASIC13.4□□□□□ -0.26
Cdkn2bP55271 Gm18057-201ENSMUST00000208220 503 ntBASIC13.4□□□□□ -0.26
Cdkn2bP55271 Gm45612-201ENSMUST00000211320 160 ntBASIC13.4□□□□□ -0.26
Cdkn2bP55271 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
Cdkn2bP55271 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cdkn2bP55271 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cdkn2bP55271 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cdkn2bP55271 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cdkn2bP55271 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Cdkn2bP55271 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Cdkn2bP55271 AC121805.2-201ENSMUST00000218808 2538 ntBASIC13.4□□□□□ -0.26
Cdkn2bP55271 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cdkn2bP55271 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cdkn2bP55271 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Cdkn2bP55271 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdkn2bP55271 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC13.39□□□□□ -0.27
Cdkn2bP55271 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdkn2bP55271 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cdkn2bP55271 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cdkn2bP55271 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdkn2bP55271 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdkn2bP55271 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdkn2bP55271 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdkn2bP55271 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Cdkn2bP55271 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
Cdkn2bP55271 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdkn2bP55271 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdkn2bP55271 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
Cdkn2bP55271 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC13.39□□□□□ -0.27
Cdkn2bP55271 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
Cdkn2bP55271 Gm13823-201ENSMUST00000119930 345 ntBASIC13.39□□□□□ -0.27
Cdkn2bP55271 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC13.39□□□□□ -0.27
Cdkn2bP55271 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdkn2bP55271 Mir3113-201ENSMUST00000175478 76 ntBASIC13.39□□□□□ -0.27
Cdkn2bP55271 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cdkn2bP55271 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC13.39□□□□□ -0.27
Cdkn2bP55271 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC13.39□□□□□ -0.27
Cdkn2bP55271 Gm5364-201ENSMUST00000216789 889 ntBASIC13.39□□□□□ -0.27
Cdkn2bP55271 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC13.39□□□□□ -0.27
Cdkn2bP55271 Mzt1-203ENSMUST00000227948 952 ntBASIC13.39□□□□□ -0.27
Cdkn2bP55271 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdkn2bP55271 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdkn2bP55271 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdkn2bP55271 CT025610.1-201ENSMUST00000224552 1786 ntBASIC13.39□□□□□ -0.27
Cdkn2bP55271 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC13.39□□□□□ -0.27
Cdkn2bP55271 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cdkn2bP55271 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cdkn2bP55271 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Cdkn2bP55271 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdkn2bP55271 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cdkn2bP55271 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdkn2bP55271 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cdkn2bP55271 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cdkn2bP55271 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdkn2bP55271 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cdkn2bP55271 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdkn2bP55271 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Cdkn2bP55271 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdkn2bP55271 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cdkn2bP55271 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdkn2bP55271 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC13.38□□□□□ -0.27
Cdkn2bP55271 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdkn2bP55271 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Cdkn2bP55271 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Cdkn2bP55271 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdkn2bP55271 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cdkn2bP55271 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Cdkn2bP55271 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC13.38□□□□□ -0.27
Cdkn2bP55271 AA543401-201ENSMUST00000164248 1269 ntBASIC13.38□□□□□ -0.27
Cdkn2bP55271 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cdkn2bP55271 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdkn2bP55271 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cdkn2bP55271 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdkn2bP55271 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdkn2bP55271 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdkn2bP55271 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms