Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC14.79□□□□□ -0.04
Shmt1P50431 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Shmt1P50431 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC14.79□□□□□ -0.04
Shmt1P50431 Gm31326-201ENSMUST00000191856 1048 ntBASIC14.79□□□□□ -0.04
Shmt1P50431 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Shmt1P50431 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC14.79□□□□□ -0.04
Shmt1P50431 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Shmt1P50431 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Shmt1P50431 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Shmt1P50431 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Shmt1P50431 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Shmt1P50431 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Shmt1P50431 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Shmt1P50431 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Shmt1P50431 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Shmt1P50431 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Shmt1P50431 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC14.78□□□□□ -0.04
Shmt1P50431 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Shmt1P50431 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Shmt1P50431 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Shmt1P50431 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Shmt1P50431 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Shmt1P50431 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.78□□□□□ -0.04
Shmt1P50431 Gm15240-201ENSMUST00000118156 720 ntBASIC14.78□□□□□ -0.04
Shmt1P50431 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC14.78□□□□□ -0.04
Shmt1P50431 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC14.78□□□□□ -0.04
Shmt1P50431 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC14.78□□□□□ -0.04
Shmt1P50431 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Shmt1P50431 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Shmt1P50431 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC14.78□□□□□ -0.04
Shmt1P50431 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC14.78□□□□□ -0.04
Shmt1P50431 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Shmt1P50431 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Shmt1P50431 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Shmt1P50431 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Shmt1P50431 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Shmt1P50431 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Shmt1P50431 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Shmt1P50431 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
Shmt1P50431 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Shmt1P50431 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Shmt1P50431 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Shmt1P50431 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.78□□□□□ -0.04
Shmt1P50431 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Shmt1P50431 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Shmt1P50431 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Shmt1P50431 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Shmt1P50431 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Shmt1P50431 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Shmt1P50431 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Shmt1P50431 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Shmt1P50431 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Shmt1P50431 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Shmt1P50431 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Shmt1P50431 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC14.77□□□□□ -0.05
Shmt1P50431 Gm11557-201ENSMUST00000120200 1008 ntBASIC14.77□□□□□ -0.05
Shmt1P50431 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC14.77□□□□□ -0.05
Shmt1P50431 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Shmt1P50431 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Shmt1P50431 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Shmt1P50431 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Shmt1P50431 Gm8927-201ENSMUST00000181978 981 ntBASIC14.77□□□□□ -0.05
Shmt1P50431 Ighv1-51-201ENSMUST00000192903 354 ntBASIC14.77□□□□□ -0.05
Shmt1P50431 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Shmt1P50431 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC14.77□□□□□ -0.05
Shmt1P50431 AC131690.1-201ENSMUST00000218406 374 ntBASIC14.77□□□□□ -0.05
Shmt1P50431 AC139580.1-202ENSMUST00000223574 928 ntBASIC14.77□□□□□ -0.05
Shmt1P50431 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Shmt1P50431 Gm3222-201ENSMUST00000071282 990 ntBASIC14.77□□□□□ -0.05
Shmt1P50431 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC14.77□□□□□ -0.05
Shmt1P50431 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Shmt1P50431 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Shmt1P50431 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Shmt1P50431 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Shmt1P50431 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Shmt1P50431 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Shmt1P50431 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Shmt1P50431 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC14.77□□□□□ -0.05
Shmt1P50431 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Shmt1P50431 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Shmt1P50431 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Shmt1P50431 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Shmt1P50431 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Shmt1P50431 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Shmt1P50431 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Shmt1P50431 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Shmt1P50431 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Shmt1P50431 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
Shmt1P50431 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Shmt1P50431 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC14.76□□□□□ -0.05
Shmt1P50431 Gm13385-201ENSMUST00000121089 220 ntBASIC14.76□□□□□ -0.05
Shmt1P50431 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC14.76□□□□□ -0.05
Shmt1P50431 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC14.76□□□□□ -0.05
Shmt1P50431 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC14.76□□□□□ -0.05
Shmt1P50431 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC14.76□□□□□ -0.05
Shmt1P50431 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC14.76□□□□□ -0.05
Shmt1P50431 Gm17795-201ENSMUST00000214505 757 ntBASIC14.76□□□□□ -0.05
Shmt1P50431 Gm7653-201ENSMUST00000214567 508 ntBASIC14.76□□□□□ -0.05
Shmt1P50431 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC14.76□□□□□ -0.05
Shmt1P50431 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms