Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ercc3P49135 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC16.63■□□□□ 0.25
Ercc3P49135 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Ercc3P49135 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ercc3P49135 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ercc3P49135 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ercc3P49135 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ercc3P49135 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ercc3P49135 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ercc3P49135 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ercc3P49135 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ercc3P49135 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ercc3P49135 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ercc3P49135 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Ercc3P49135 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ercc3P49135 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Ercc3P49135 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC16.62■□□□□ 0.25
Ercc3P49135 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ercc3P49135 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ercc3P49135 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Ercc3P49135 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC16.62■□□□□ 0.25
Ercc3P49135 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Ercc3P49135 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ercc3P49135 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC16.62■□□□□ 0.25
Ercc3P49135 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC16.62■□□□□ 0.25
Ercc3P49135 AC125206.2-201ENSMUST00000217454 574 ntBASIC16.62■□□□□ 0.25
Ercc3P49135 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ercc3P49135 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Ercc3P49135 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ercc3P49135 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ercc3P49135 Gm9347-201ENSMUST00000211473 1607 ntBASIC16.62■□□□□ 0.25
Ercc3P49135 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC16.62■□□□□ 0.25
Ercc3P49135 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ercc3P49135 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ercc3P49135 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ercc3P49135 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Ercc3P49135 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ercc3P49135 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ercc3P49135 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ercc3P49135 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ercc3P49135 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Ercc3P49135 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Ercc3P49135 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Ercc3P49135 Mir8102-201ENSMUST00000184148 139 ntBASIC16.61■□□□□ 0.25
Ercc3P49135 Gm29667-201ENSMUST00000190817 490 ntBASIC16.61■□□□□ 0.25
Ercc3P49135 AC154846.1-201ENSMUST00000226278 862 ntBASIC16.61■□□□□ 0.25
Ercc3P49135 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ercc3P49135 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
Ercc3P49135 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ercc3P49135 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ercc3P49135 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ercc3P49135 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ercc3P49135 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ercc3P49135 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC16.61■□□□□ 0.25
Ercc3P49135 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ercc3P49135 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
Ercc3P49135 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ercc3P49135 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ercc3P49135 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ercc3P49135 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ercc3P49135 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Ercc3P49135 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC16.6■□□□□ 0.25
Ercc3P49135 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ercc3P49135 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ercc3P49135 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ercc3P49135 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC16.6■□□□□ 0.25
Ercc3P49135 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ercc3P49135 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ercc3P49135 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ercc3P49135 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC16.6■□□□□ 0.25
Ercc3P49135 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ercc3P49135 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ercc3P49135 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ercc3P49135 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC16.6■□□□□ 0.25
Ercc3P49135 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Ercc3P49135 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC16.6■□□□□ 0.25
Ercc3P49135 Gm14719-201ENSMUST00000121891 340 ntBASIC16.6■□□□□ 0.25
Ercc3P49135 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC16.6■□□□□ 0.25
Ercc3P49135 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ercc3P49135 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ercc3P49135 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ercc3P49135 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ercc3P49135 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ercc3P49135 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ercc3P49135 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ercc3P49135 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC16.6■□□□□ 0.25
Ercc3P49135 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Ercc3P49135 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ercc3P49135 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ercc3P49135 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ercc3P49135 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ercc3P49135 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
Ercc3P49135 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ercc3P49135 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ercc3P49135 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ercc3P49135 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ercc3P49135 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ercc3P49135 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ercc3P49135 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Ercc3P49135 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms