Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
GdnfP48540 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC12.28□□□□□ -0.44
GdnfP48540 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
GdnfP48540 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
GdnfP48540 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
GdnfP48540 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
GdnfP48540 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
GdnfP48540 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
GdnfP48540 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC12.28□□□□□ -0.44
GdnfP48540 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
GdnfP48540 Gm8597-201ENSMUST00000191525 1109 ntBASIC12.28□□□□□ -0.44
GdnfP48540 Gm45683-201ENSMUST00000210825 1247 ntBASIC12.28□□□□□ -0.44
GdnfP48540 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
GdnfP48540 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
GdnfP48540 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
GdnfP48540 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
GdnfP48540 Gm38102-201ENSMUST00000192791 1935 ntBASIC12.28□□□□□ -0.44
GdnfP48540 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
GdnfP48540 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC12.28□□□□□ -0.44
GdnfP48540 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
GdnfP48540 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
GdnfP48540 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
GdnfP48540 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
GdnfP48540 Tcf21-202ENSMUST00000218002 1788 ntBASIC12.28□□□□□ -0.44
GdnfP48540 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
GdnfP48540 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
GdnfP48540 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
GdnfP48540 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
GdnfP48540 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
GdnfP48540 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
GdnfP48540 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
GdnfP48540 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
GdnfP48540 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
GdnfP48540 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
GdnfP48540 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
GdnfP48540 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
GdnfP48540 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.44
GdnfP48540 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
GdnfP48540 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
GdnfP48540 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC12.27□□□□□ -0.45
GdnfP48540 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
GdnfP48540 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
GdnfP48540 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
GdnfP48540 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
GdnfP48540 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC12.27□□□□□ -0.45
GdnfP48540 H2af-ps-201ENSMUST00000119066 295 ntBASIC12.27□□□□□ -0.45
GdnfP48540 Gm25911-201ENSMUST00000157621 56 ntBASIC12.27□□□□□ -0.45
GdnfP48540 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
GdnfP48540 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC12.27□□□□□ -0.45
GdnfP48540 Gm18041-201ENSMUST00000218210 618 ntBASIC12.27□□□□□ -0.45
GdnfP48540 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC12.27□□□□□ -0.45
GdnfP48540 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
GdnfP48540 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
GdnfP48540 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
GdnfP48540 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
GdnfP48540 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
GdnfP48540 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
GdnfP48540 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC12.27□□□□□ -0.45
GdnfP48540 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
GdnfP48540 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
GdnfP48540 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
GdnfP48540 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.27□□□□□ -0.45
GdnfP48540 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
GdnfP48540 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
GdnfP48540 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
GdnfP48540 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
GdnfP48540 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
GdnfP48540 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
GdnfP48540 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
GdnfP48540 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
GdnfP48540 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.45
GdnfP48540 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
GdnfP48540 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
GdnfP48540 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC12.26□□□□□ -0.45
GdnfP48540 Gm6226-201ENSMUST00000117765 1146 ntBASIC12.26□□□□□ -0.45
GdnfP48540 Gm11594-201ENSMUST00000122313 162 ntBASIC12.26□□□□□ -0.45
GdnfP48540 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
GdnfP48540 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
GdnfP48540 Gm9726-201ENSMUST00000180321 678 ntBASIC12.26□□□□□ -0.45
GdnfP48540 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
GdnfP48540 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
GdnfP48540 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC12.26□□□□□ -0.45
GdnfP48540 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
GdnfP48540 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
GdnfP48540 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC12.26□□□□□ -0.45
GdnfP48540 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC12.26□□□□□ -0.45
GdnfP48540 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
GdnfP48540 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
GdnfP48540 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
GdnfP48540 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
GdnfP48540 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
GdnfP48540 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
GdnfP48540 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
GdnfP48540 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC12.26□□□□□ -0.45
GdnfP48540 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
GdnfP48540 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
GdnfP48540 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC12.26□□□□□ -0.45
GdnfP48540 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
GdnfP48540 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
GdnfP48540 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms