Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rfx3P48381 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rfx3P48381 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rfx3P48381 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Rfx3P48381 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rfx3P48381 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rfx3P48381 Gm42934-201ENSMUST00000196920 1345 ntBASIC12.65□□□□□ -0.38
Rfx3P48381 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rfx3P48381 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC12.65□□□□□ -0.38
Rfx3P48381 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rfx3P48381 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rfx3P48381 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rfx3P48381 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Rfx3P48381 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC12.65□□□□□ -0.38
Rfx3P48381 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rfx3P48381 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rfx3P48381 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rfx3P48381 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rfx3P48381 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rfx3P48381 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rfx3P48381 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC12.65□□□□□ -0.38
Rfx3P48381 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rfx3P48381 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC12.65□□□□□ -0.38
Rfx3P48381 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rfx3P48381 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rfx3P48381 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC12.65□□□□□ -0.38
Rfx3P48381 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC12.65□□□□□ -0.38
Rfx3P48381 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC12.65□□□□□ -0.38
Rfx3P48381 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rfx3P48381 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rfx3P48381 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rfx3P48381 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rfx3P48381 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rfx3P48381 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rfx3P48381 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rfx3P48381 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Rfx3P48381 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC12.65□□□□□ -0.38
Rfx3P48381 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC12.65□□□□□ -0.38
Rfx3P48381 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rfx3P48381 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rfx3P48381 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rfx3P48381 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rfx3P48381 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rfx3P48381 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rfx3P48381 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Rfx3P48381 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Rfx3P48381 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.39
Rfx3P48381 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Rfx3P48381 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rfx3P48381 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC12.64□□□□□ -0.39
Rfx3P48381 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rfx3P48381 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC12.64□□□□□ -0.39
Rfx3P48381 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rfx3P48381 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rfx3P48381 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rfx3P48381 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rfx3P48381 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC12.64□□□□□ -0.39
Rfx3P48381 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rfx3P48381 H2af-ps-201ENSMUST00000119066 295 ntBASIC12.64□□□□□ -0.39
Rfx3P48381 Rprl2-201ENSMUST00000157150 290 ntBASIC12.64□□□□□ -0.39
Rfx3P48381 Gm10275-202ENSMUST00000168697 495 ntBASIC12.64□□□□□ -0.39
Rfx3P48381 Gm38225-201ENSMUST00000194001 393 ntBASIC12.64□□□□□ -0.39
Rfx3P48381 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC12.64□□□□□ -0.39
Rfx3P48381 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC12.64□□□□□ -0.39
Rfx3P48381 Ndufaf2-202ENSMUST00000223734 556 ntBASIC12.64□□□□□ -0.39
Rfx3P48381 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rfx3P48381 Gm10275-201ENSMUST00000092620 635 ntBASIC12.64□□□□□ -0.39
Rfx3P48381 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rfx3P48381 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Rfx3P48381 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rfx3P48381 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rfx3P48381 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rfx3P48381 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rfx3P48381 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rfx3P48381 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rfx3P48381 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC12.64□□□□□ -0.39
Rfx3P48381 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rfx3P48381 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Rfx3P48381 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rfx3P48381 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Rfx3P48381 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rfx3P48381 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Rfx3P48381 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rfx3P48381 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Rfx3P48381 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Rfx3P48381 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rfx3P48381 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rfx3P48381 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC12.63□□□□□ -0.39
Rfx3P48381 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC12.63□□□□□ -0.39
Rfx3P48381 Gm18041-201ENSMUST00000218210 618 ntBASIC12.63□□□□□ -0.39
Rfx3P48381 AC166341.4-201ENSMUST00000220625 123 ntBASIC12.63□□□□□ -0.39
Rfx3P48381 Gm5628-201ENSMUST00000222318 1049 ntBASIC12.63□□□□□ -0.39
Rfx3P48381 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC12.63□□□□□ -0.39
Rfx3P48381 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rfx3P48381 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rfx3P48381 Gm15500-202ENSMUST00000071641 1019 ntBASIC12.63□□□□□ -0.39
Rfx3P48381 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rfx3P48381 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rfx3P48381 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Rfx3P48381 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms