Protein–RNA interactions for Protein: P48030

Tgfa, Protransforming growth factor alpha, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TgfaP48030 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TgfaP48030 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TgfaP48030 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
TgfaP48030 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
TgfaP48030 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
TgfaP48030 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TgfaP48030 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TgfaP48030 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TgfaP48030 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
TgfaP48030 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TgfaP48030 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
TgfaP48030 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TgfaP48030 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC12.11□□□□□ -0.47
TgfaP48030 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TgfaP48030 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TgfaP48030 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC12.11□□□□□ -0.47
TgfaP48030 Gm45880-201ENSMUST00000213041 853 ntBASIC12.11□□□□□ -0.47
TgfaP48030 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TgfaP48030 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC12.11□□□□□ -0.47
TgfaP48030 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TgfaP48030 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TgfaP48030 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
TgfaP48030 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TgfaP48030 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
TgfaP48030 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TgfaP48030 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
TgfaP48030 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TgfaP48030 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
TgfaP48030 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
TgfaP48030 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TgfaP48030 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
TgfaP48030 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
TgfaP48030 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
TgfaP48030 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TgfaP48030 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TgfaP48030 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TgfaP48030 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TgfaP48030 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TgfaP48030 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
TgfaP48030 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TgfaP48030 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
TgfaP48030 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TgfaP48030 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TgfaP48030 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
TgfaP48030 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TgfaP48030 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
TgfaP48030 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TgfaP48030 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC12.1□□□□□ -0.47
TgfaP48030 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TgfaP48030 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
TgfaP48030 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TgfaP48030 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TgfaP48030 Gm14730-201ENSMUST00000122378 1045 ntBASIC12.1□□□□□ -0.47
TgfaP48030 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC12.1□□□□□ -0.47
TgfaP48030 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC12.1□□□□□ -0.47
TgfaP48030 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC12.1□□□□□ -0.47
TgfaP48030 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TgfaP48030 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
TgfaP48030 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TgfaP48030 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC12.1□□□□□ -0.47
TgfaP48030 Gm7498-201ENSMUST00000203282 1084 ntBASIC12.1□□□□□ -0.47
TgfaP48030 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC12.1□□□□□ -0.47
TgfaP48030 AC102291.3-201ENSMUST00000226566 405 ntBASIC12.1□□□□□ -0.47
TgfaP48030 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TgfaP48030 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
TgfaP48030 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TgfaP48030 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TgfaP48030 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TgfaP48030 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
TgfaP48030 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
TgfaP48030 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
TgfaP48030 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC12.1□□□□□ -0.47
TgfaP48030 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TgfaP48030 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TgfaP48030 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TgfaP48030 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TgfaP48030 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
TgfaP48030 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
TgfaP48030 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
TgfaP48030 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TgfaP48030 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
TgfaP48030 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TgfaP48030 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TgfaP48030 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
TgfaP48030 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
TgfaP48030 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
TgfaP48030 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
TgfaP48030 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
TgfaP48030 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
TgfaP48030 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TgfaP48030 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TgfaP48030 BC037039-201ENSMUST00000192003 2205 ntBASIC12.09□□□□□ -0.47
TgfaP48030 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TgfaP48030 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
TgfaP48030 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC12.09□□□□□ -0.47
TgfaP48030 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
TgfaP48030 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
TgfaP48030 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
TgfaP48030 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TgfaP48030 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms