Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vps4bP46467 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vps4bP46467 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vps4bP46467 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vps4bP46467 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vps4bP46467 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
Vps4bP46467 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC14.21□□□□□ -0.13
Vps4bP46467 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Vps4bP46467 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Vps4bP46467 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vps4bP46467 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vps4bP46467 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.21□□□□□ -0.13
Vps4bP46467 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vps4bP46467 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vps4bP46467 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Vps4bP46467 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14.21□□□□□ -0.13
Vps4bP46467 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Vps4bP46467 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Vps4bP46467 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Vps4bP46467 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Vps4bP46467 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Vps4bP46467 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Vps4bP46467 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Vps4bP46467 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC14.21□□□□□ -0.14
Vps4bP46467 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps4bP46467 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps4bP46467 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Vps4bP46467 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps4bP46467 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Vps4bP46467 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps4bP46467 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Vps4bP46467 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps4bP46467 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Vps4bP46467 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps4bP46467 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Vps4bP46467 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps4bP46467 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Vps4bP46467 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Vps4bP46467 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC14.2□□□□□ -0.14
Vps4bP46467 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps4bP46467 Gm11745-201ENSMUST00000121669 448 ntBASIC14.2□□□□□ -0.14
Vps4bP46467 Mir1895-201ENSMUST00000122615 79 ntBASIC14.2□□□□□ -0.14
Vps4bP46467 Gm27494-201ENSMUST00000184735 189 ntBASIC14.2□□□□□ -0.14
Vps4bP46467 Ighv8-14-201ENSMUST00000196781 358 ntBASIC14.2□□□□□ -0.14
Vps4bP46467 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC14.2□□□□□ -0.14
Vps4bP46467 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC14.2□□□□□ -0.14
Vps4bP46467 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC14.2□□□□□ -0.14
Vps4bP46467 Gm8396-201ENSMUST00000057361 823 ntBASIC14.2□□□□□ -0.14
Vps4bP46467 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Vps4bP46467 Gm19863-201ENSMUST00000192480 2218 ntBASIC14.2□□□□□ -0.14
Vps4bP46467 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps4bP46467 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps4bP46467 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps4bP46467 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC14.2□□□□□ -0.14
Vps4bP46467 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps4bP46467 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC14.2□□□□□ -0.14
Vps4bP46467 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC14.2□□□□□ -0.14
Vps4bP46467 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps4bP46467 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Vps4bP46467 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vps4bP46467 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Vps4bP46467 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vps4bP46467 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Vps4bP46467 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vps4bP46467 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Vps4bP46467 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vps4bP46467 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Vps4bP46467 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vps4bP46467 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Vps4bP46467 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC14.19□□□□□ -0.14
Vps4bP46467 Gm12020-201ENSMUST00000119030 2042 ntBASIC14.19□□□□□ -0.14
Vps4bP46467 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vps4bP46467 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Vps4bP46467 Gm6222-201ENSMUST00000120787 396 ntBASIC14.19□□□□□ -0.14
Vps4bP46467 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Vps4bP46467 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC14.19□□□□□ -0.14
Vps4bP46467 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Vps4bP46467 Gm18049-201ENSMUST00000208909 581 ntBASIC14.19□□□□□ -0.14
Vps4bP46467 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vps4bP46467 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vps4bP46467 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC14.19□□□□□ -0.14
Vps4bP46467 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vps4bP46467 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
Vps4bP46467 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Vps4bP46467 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Vps4bP46467 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vps4bP46467 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vps4bP46467 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Vps4bP46467 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vps4bP46467 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vps4bP46467 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Vps4bP46467 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps4bP46467 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps4bP46467 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps4bP46467 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps4bP46467 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC14.18□□□□□ -0.14
Vps4bP46467 Gm11405-201ENSMUST00000118689 1556 ntBASIC14.18□□□□□ -0.14
Vps4bP46467 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps4bP46467 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps4bP46467 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms