Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC13.24□□□□□ -0.29
Nkx2-6P43688 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Nkx2-6P43688 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx2-6P43688 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx2-6P43688 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Nkx2-6P43688 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx2-6P43688 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx2-6P43688 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Nkx2-6P43688 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx2-6P43688 Gm42632-201ENSMUST00000201707 2411 ntBASIC13.23□□□□□ -0.29
Nkx2-6P43688 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx2-6P43688 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx2-6P43688 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx2-6P43688 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC13.23□□□□□ -0.29
Nkx2-6P43688 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx2-6P43688 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx2-6P43688 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx2-6P43688 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx2-6P43688 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx2-6P43688 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC13.23□□□□□ -0.29
Nkx2-6P43688 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx2-6P43688 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Nkx2-6P43688 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx2-6P43688 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx2-6P43688 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx2-6P43688 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx2-6P43688 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx2-6P43688 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC13.23□□□□□ -0.29
Nkx2-6P43688 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx2-6P43688 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC13.23□□□□□ -0.29
Nkx2-6P43688 AC155729.1-201ENSMUST00000227758 544 ntBASIC13.23□□□□□ -0.29
Nkx2-6P43688 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx2-6P43688 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx2-6P43688 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx2-6P43688 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx2-6P43688 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
Nkx2-6P43688 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
Nkx2-6P43688 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx2-6P43688 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx2-6P43688 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC13.23□□□□□ -0.29
Nkx2-6P43688 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx2-6P43688 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Nkx2-6P43688 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx2-6P43688 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx2-6P43688 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx2-6P43688 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkx2-6P43688 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkx2-6P43688 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkx2-6P43688 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Nkx2-6P43688 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkx2-6P43688 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Nkx2-6P43688 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC13.22□□□□□ -0.29
Nkx2-6P43688 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Nkx2-6P43688 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkx2-6P43688 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Nkx2-6P43688 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkx2-6P43688 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkx2-6P43688 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
Nkx2-6P43688 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC13.22□□□□□ -0.29
Nkx2-6P43688 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC13.22□□□□□ -0.29
Nkx2-6P43688 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Nkx2-6P43688 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC13.22□□□□□ -0.29
Nkx2-6P43688 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC13.22□□□□□ -0.29
Nkx2-6P43688 AC162801.1-201ENSMUST00000220612 198 ntBASIC13.22□□□□□ -0.29
Nkx2-6P43688 Cdk7-205ENSMUST00000225990 1159 ntBASIC13.22□□□□□ -0.29
Nkx2-6P43688 AC155252.1-201ENSMUST00000226462 1208 ntBASIC13.22□□□□□ -0.29
Nkx2-6P43688 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkx2-6P43688 Gm25857-201ENSMUST00000082788 129 ntBASIC13.22□□□□□ -0.29
Nkx2-6P43688 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkx2-6P43688 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC13.22□□□□□ -0.29
Nkx2-6P43688 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Nkx2-6P43688 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Nkx2-6P43688 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkx2-6P43688 AC154527.2-201ENSMUST00000225256 1466 ntBASIC13.22□□□□□ -0.29
Nkx2-6P43688 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Nkx2-6P43688 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkx2-6P43688 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC13.22□□□□□ -0.29
Nkx2-6P43688 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Nkx2-6P43688 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Nkx2-6P43688 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nkx2-6P43688 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nkx2-6P43688 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nkx2-6P43688 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13.21□□□□□ -0.29
Nkx2-6P43688 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nkx2-6P43688 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nkx2-6P43688 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nkx2-6P43688 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC13.21□□□□□ -0.29
Nkx2-6P43688 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nkx2-6P43688 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Nkx2-6P43688 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Nkx2-6P43688 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Nkx2-6P43688 Gm17150-201ENSMUST00000165577 381 ntBASIC13.21□□□□□ -0.29
Nkx2-6P43688 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Nkx2-6P43688 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Nkx2-6P43688 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC13.21□□□□□ -0.29
Nkx2-6P43688 Gm28911-201ENSMUST00000188837 117 ntBASIC13.21□□□□□ -0.29
Nkx2-6P43688 Gm17795-201ENSMUST00000214505 757 ntBASIC13.21□□□□□ -0.29
Nkx2-6P43688 CT030657.3-201ENSMUST00000222707 1200 ntBASIC13.21□□□□□ -0.29
Nkx2-6P43688 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nkx2-6P43688 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms