Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Timp3P39876 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Timp3P39876 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Timp3P39876 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Timp3P39876 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Timp3P39876 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Timp3P39876 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Timp3P39876 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Timp3P39876 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Timp3P39876 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Timp3P39876 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Timp3P39876 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Timp3P39876 Gm4204-201ENSMUST00000110798 1231 ntBASIC11.5□□□□□ -0.57
Timp3P39876 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Timp3P39876 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC11.5□□□□□ -0.57
Timp3P39876 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC11.5□□□□□ -0.57
Timp3P39876 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC11.5□□□□□ -0.57
Timp3P39876 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Timp3P39876 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Timp3P39876 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Timp3P39876 AA619741-201ENSMUST00000195095 646 ntBASIC11.5□□□□□ -0.57
Timp3P39876 Dupd1-202ENSMUST00000224735 548 ntBASIC11.5□□□□□ -0.57
Timp3P39876 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Timp3P39876 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Timp3P39876 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Timp3P39876 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
Timp3P39876 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Timp3P39876 Syt7-204ENSMUST00000223586 1344 ntBASIC11.5□□□□□ -0.57
Timp3P39876 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Timp3P39876 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC11.5□□□□□ -0.57
Timp3P39876 Gm45779-201ENSMUST00000212189 4064 ntBASIC11.5□□□□□ -0.57
Timp3P39876 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Timp3P39876 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Timp3P39876 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Timp3P39876 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Timp3P39876 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Timp3P39876 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Timp3P39876 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC11.49□□□□□ -0.57
Timp3P39876 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Timp3P39876 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Timp3P39876 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Timp3P39876 AC121805.2-201ENSMUST00000218808 2538 ntBASIC11.49□□□□□ -0.57
Timp3P39876 Gm42829-201ENSMUST00000198417 2585 ntBASIC11.49□□□□□ -0.57
Timp3P39876 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC11.49□□□□□ -0.57
Timp3P39876 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Timp3P39876 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Timp3P39876 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Timp3P39876 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Timp3P39876 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Timp3P39876 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Timp3P39876 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Timp3P39876 Gm7488-201ENSMUST00000117148 684 ntBASIC11.49□□□□□ -0.57
Timp3P39876 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC11.49□□□□□ -0.57
Timp3P39876 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC11.49□□□□□ -0.57
Timp3P39876 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC11.49□□□□□ -0.57
Timp3P39876 Gm15487-201ENSMUST00000122373 465 ntBASIC11.49□□□□□ -0.57
Timp3P39876 Mir1897-201ENSMUST00000122581 272 ntBASIC11.49□□□□□ -0.57
Timp3P39876 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Timp3P39876 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Timp3P39876 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC11.49□□□□□ -0.57
Timp3P39876 Gm37230-201ENSMUST00000194491 818 ntBASIC11.49□□□□□ -0.57
Timp3P39876 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Timp3P39876 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Timp3P39876 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC11.49□□□□□ -0.57
Timp3P39876 Gm46209-201ENSMUST00000217912 553 ntBASIC11.49□□□□□ -0.57
Timp3P39876 AC238811.1-201ENSMUST00000225302 441 ntBASIC11.49□□□□□ -0.57
Timp3P39876 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Timp3P39876 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Timp3P39876 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Timp3P39876 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Timp3P39876 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Timp3P39876 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Timp3P39876 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Timp3P39876 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Timp3P39876 Gm3365-201ENSMUST00000216296 1480 ntBASIC11.49□□□□□ -0.57
Timp3P39876 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Timp3P39876 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Timp3P39876 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Timp3P39876 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Timp3P39876 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Timp3P39876 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Timp3P39876 Ntrk2-208ENSMUST00000225583 2719 ntBASIC11.49□□□□□ -0.57
Timp3P39876 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Timp3P39876 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC11.49□□□□□ -0.57
Timp3P39876 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Timp3P39876 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Timp3P39876 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Timp3P39876 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Timp3P39876 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Timp3P39876 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Timp3P39876 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Timp3P39876 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Timp3P39876 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC11.48□□□□□ -0.57
Timp3P39876 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Timp3P39876 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Timp3P39876 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Timp3P39876 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Timp3P39876 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Timp3P39876 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Timp3P39876 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms