Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Upk2P38575 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Upk2P38575 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Upk2P38575 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Upk2P38575 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
Upk2P38575 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC12.29□□□□□ -0.44
Upk2P38575 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Upk2P38575 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC12.29□□□□□ -0.44
Upk2P38575 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Upk2P38575 Gm25948-201ENSMUST00000175334 112 ntBASIC12.29□□□□□ -0.44
Upk2P38575 Gm3809-201ENSMUST00000180973 1006 ntBASIC12.29□□□□□ -0.44
Upk2P38575 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC12.29□□□□□ -0.44
Upk2P38575 Gm33320-201ENSMUST00000192232 530 ntBASIC12.29□□□□□ -0.44
Upk2P38575 Gm29741-201ENSMUST00000192667 421 ntBASIC12.29□□□□□ -0.44
Upk2P38575 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Upk2P38575 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC12.29□□□□□ -0.44
Upk2P38575 AC124732.2-201ENSMUST00000221977 316 ntBASIC12.29□□□□□ -0.44
Upk2P38575 AC149294.4-201ENSMUST00000227870 882 ntBASIC12.29□□□□□ -0.44
Upk2P38575 AC154806.6-201ENSMUST00000228192 202 ntBASIC12.29□□□□□ -0.44
Upk2P38575 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Upk2P38575 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Upk2P38575 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Upk2P38575 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Upk2P38575 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Upk2P38575 AC114543.1-201ENSMUST00000226451 1558 ntBASIC12.29□□□□□ -0.44
Upk2P38575 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Upk2P38575 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Upk2P38575 Fgf17-202ENSMUST00000227123 1336 ntBASIC12.29□□□□□ -0.44
Upk2P38575 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Upk2P38575 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC12.29□□□□□ -0.44
Upk2P38575 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Upk2P38575 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Upk2P38575 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Upk2P38575 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Upk2P38575 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Upk2P38575 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Upk2P38575 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
Upk2P38575 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Upk2P38575 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Upk2P38575 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Upk2P38575 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Upk2P38575 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Upk2P38575 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Upk2P38575 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Upk2P38575 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Upk2P38575 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Upk2P38575 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Upk2P38575 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
Upk2P38575 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Upk2P38575 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC12.28□□□□□ -0.44
Upk2P38575 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
Upk2P38575 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC12.28□□□□□ -0.44
Upk2P38575 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Upk2P38575 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Upk2P38575 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC12.28□□□□□ -0.44
Upk2P38575 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Upk2P38575 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC12.28□□□□□ -0.44
Upk2P38575 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Upk2P38575 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Upk2P38575 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Upk2P38575 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Upk2P38575 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Upk2P38575 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Upk2P38575 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Upk2P38575 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Upk2P38575 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Upk2P38575 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC12.28□□□□□ -0.44
Upk2P38575 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC12.28□□□□□ -0.44
Upk2P38575 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC12.28□□□□□ -0.44
Upk2P38575 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC12.28□□□□□ -0.44
Upk2P38575 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Upk2P38575 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Upk2P38575 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC12.28□□□□□ -0.44
Upk2P38575 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Upk2P38575 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Upk2P38575 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC12.27□□□□□ -0.44
Upk2P38575 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC12.27□□□□□ -0.44
Upk2P38575 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Upk2P38575 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Upk2P38575 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC12.27□□□□□ -0.45
Upk2P38575 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Upk2P38575 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC12.27□□□□□ -0.45
Upk2P38575 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC12.27□□□□□ -0.45
Upk2P38575 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC12.27□□□□□ -0.45
Upk2P38575 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC12.27□□□□□ -0.45
Upk2P38575 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Upk2P38575 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC12.27□□□□□ -0.45
Upk2P38575 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC12.27□□□□□ -0.45
Upk2P38575 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Upk2P38575 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Upk2P38575 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Upk2P38575 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC12.27□□□□□ -0.45
Upk2P38575 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Upk2P38575 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Upk2P38575 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Upk2P38575 AC154767.3-201ENSMUST00000225150 1342 ntBASIC12.27□□□□□ -0.45
Upk2P38575 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Upk2P38575 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Upk2P38575 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Upk2P38575 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms