Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HmgclP38060 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HmgclP38060 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
HmgclP38060 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HmgclP38060 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC13.8□□□□□ -0.2
HmgclP38060 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC13.8□□□□□ -0.2
HmgclP38060 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HmgclP38060 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HmgclP38060 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
HmgclP38060 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HmgclP38060 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC13.8□□□□□ -0.2
HmgclP38060 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
HmgclP38060 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HmgclP38060 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
HmgclP38060 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
HmgclP38060 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HmgclP38060 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
HmgclP38060 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
HmgclP38060 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HmgclP38060 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC13.79□□□□□ -0.2
HmgclP38060 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
HmgclP38060 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
HmgclP38060 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
HmgclP38060 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HmgclP38060 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC13.79□□□□□ -0.2
HmgclP38060 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
HmgclP38060 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC13.79□□□□□ -0.2
HmgclP38060 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC13.79□□□□□ -0.2
HmgclP38060 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
HmgclP38060 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HmgclP38060 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
HmgclP38060 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HmgclP38060 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC13.79□□□□□ -0.2
HmgclP38060 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC13.79□□□□□ -0.2
HmgclP38060 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
HmgclP38060 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
HmgclP38060 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HmgclP38060 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
HmgclP38060 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
HmgclP38060 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
HmgclP38060 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
HmgclP38060 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HmgclP38060 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
HmgclP38060 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HmgclP38060 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
HmgclP38060 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
HmgclP38060 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HmgclP38060 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HmgclP38060 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HmgclP38060 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
HmgclP38060 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HmgclP38060 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
HmgclP38060 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
HmgclP38060 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
HmgclP38060 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
HmgclP38060 Gm10766-202ENSMUST00000194123 606 ntBASIC13.78□□□□□ -0.2
HmgclP38060 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HmgclP38060 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC13.78□□□□□ -0.2
HmgclP38060 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HmgclP38060 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
HmgclP38060 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HmgclP38060 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
HmgclP38060 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HmgclP38060 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
HmgclP38060 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HmgclP38060 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
HmgclP38060 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
HmgclP38060 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
HmgclP38060 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
HmgclP38060 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
HmgclP38060 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HmgclP38060 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC13.77□□□□□ -0.21
HmgclP38060 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HmgclP38060 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
HmgclP38060 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
HmgclP38060 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
HmgclP38060 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
HmgclP38060 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
HmgclP38060 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC13.77□□□□□ -0.21
HmgclP38060 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
HmgclP38060 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
HmgclP38060 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
HmgclP38060 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC13.77□□□□□ -0.21
HmgclP38060 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC13.77□□□□□ -0.21
HmgclP38060 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
HmgclP38060 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HmgclP38060 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HmgclP38060 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HmgclP38060 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HmgclP38060 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC13.77□□□□□ -0.21
HmgclP38060 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HmgclP38060 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
HmgclP38060 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
HmgclP38060 Mir497b-201ENSMUST00000093601 125 ntBASIC13.77□□□□□ -0.21
HmgclP38060 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
HmgclP38060 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
HmgclP38060 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HmgclP38060 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
HmgclP38060 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HmgclP38060 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 101.5 ms