Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Gm26399-201ENSMUST00000103937 110 ntBASIC13.94□□□□□ -0.18
LdlrP35951 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
LdlrP35951 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC13.94□□□□□ -0.18
LdlrP35951 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LdlrP35951 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC13.94□□□□□ -0.18
LdlrP35951 Gm25349-201ENSMUST00000177728 110 ntBASIC13.94□□□□□ -0.18
LdlrP35951 Gm23616-201ENSMUST00000177797 110 ntBASIC13.94□□□□□ -0.18
LdlrP35951 Gm25871-201ENSMUST00000177816 110 ntBASIC13.94□□□□□ -0.18
LdlrP35951 Gm24752-201ENSMUST00000178240 110 ntBASIC13.94□□□□□ -0.18
LdlrP35951 Gm24496-201ENSMUST00000178287 110 ntBASIC13.94□□□□□ -0.18
LdlrP35951 Gm25649-201ENSMUST00000178476 110 ntBASIC13.94□□□□□ -0.18
LdlrP35951 Gm25548-201ENSMUST00000178681 110 ntBASIC13.94□□□□□ -0.18
LdlrP35951 Gm23147-201ENSMUST00000178841 110 ntBASIC13.94□□□□□ -0.18
LdlrP35951 Gm26095-201ENSMUST00000179270 110 ntBASIC13.94□□□□□ -0.18
LdlrP35951 Gm22171-201ENSMUST00000179283 110 ntBASIC13.94□□□□□ -0.18
LdlrP35951 Gm23936-201ENSMUST00000179354 110 ntBASIC13.94□□□□□ -0.18
LdlrP35951 Gm22619-201ENSMUST00000179516 110 ntBASIC13.94□□□□□ -0.18
LdlrP35951 Gm25255-201ENSMUST00000179579 110 ntBASIC13.94□□□□□ -0.18
LdlrP35951 Gm24755-201ENSMUST00000179691 110 ntBASIC13.94□□□□□ -0.18
LdlrP35951 Gm26506-201ENSMUST00000179692 110 ntBASIC13.94□□□□□ -0.18
LdlrP35951 Gm25086-201ENSMUST00000179931 110 ntBASIC13.94□□□□□ -0.18
LdlrP35951 Gm23243-201ENSMUST00000180047 110 ntBASIC13.94□□□□□ -0.18
LdlrP35951 Gm24659-201ENSMUST00000180212 110 ntBASIC13.94□□□□□ -0.18
LdlrP35951 Gm24169-201ENSMUST00000180244 110 ntBASIC13.94□□□□□ -0.18
LdlrP35951 Gm23689-201ENSMUST00000180354 110 ntBASIC13.94□□□□□ -0.18
LdlrP35951 Gm27359-201ENSMUST00000184153 110 ntBASIC13.94□□□□□ -0.18
LdlrP35951 Gm27785-201ENSMUST00000184268 110 ntBASIC13.94□□□□□ -0.18
LdlrP35951 Gm27466-201ENSMUST00000184396 110 ntBASIC13.94□□□□□ -0.18
LdlrP35951 Gm27703-201ENSMUST00000184836 110 ntBASIC13.94□□□□□ -0.18
LdlrP35951 Gm38346-201ENSMUST00000192379 2639 ntBASIC13.94□□□□□ -0.18
LdlrP35951 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC13.94□□□□□ -0.18
LdlrP35951 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC13.94□□□□□ -0.18
LdlrP35951 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
LdlrP35951 AC126408.1-201ENSMUST00000225184 523 ntBASIC13.94□□□□□ -0.18
LdlrP35951 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LdlrP35951 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LdlrP35951 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LdlrP35951 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
LdlrP35951 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
LdlrP35951 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC13.94□□□□□ -0.18
LdlrP35951 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LdlrP35951 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
LdlrP35951 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
LdlrP35951 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
LdlrP35951 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
LdlrP35951 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LdlrP35951 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC13.93□□□□□ -0.18
LdlrP35951 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LdlrP35951 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
LdlrP35951 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
LdlrP35951 Nudt18-203ENSMUST00000228768 1578 ntBASIC13.93□□□□□ -0.18
LdlrP35951 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LdlrP35951 Gm9109-201ENSMUST00000120254 1405 ntBASIC13.93□□□□□ -0.18
LdlrP35951 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LdlrP35951 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LdlrP35951 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
LdlrP35951 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
LdlrP35951 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
LdlrP35951 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
LdlrP35951 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC13.93□□□□□ -0.18
LdlrP35951 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC13.93□□□□□ -0.18
LdlrP35951 Gm5745-201ENSMUST00000183748 313 ntBASIC13.93□□□□□ -0.18
LdlrP35951 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC13.93□□□□□ -0.18
LdlrP35951 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LdlrP35951 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LdlrP35951 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LdlrP35951 Gm5763-201ENSMUST00000155951 1530 ntBASIC13.93□□□□□ -0.18
LdlrP35951 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
LdlrP35951 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LdlrP35951 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
LdlrP35951 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LdlrP35951 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LdlrP35951 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
LdlrP35951 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LdlrP35951 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
LdlrP35951 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LdlrP35951 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LdlrP35951 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
LdlrP35951 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LdlrP35951 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LdlrP35951 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LdlrP35951 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC13.92□□□□□ -0.18
LdlrP35951 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
LdlrP35951 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LdlrP35951 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LdlrP35951 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC13.92□□□□□ -0.18
LdlrP35951 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC13.92□□□□□ -0.18
LdlrP35951 Gm15483-201ENSMUST00000120338 456 ntBASIC13.92□□□□□ -0.18
LdlrP35951 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LdlrP35951 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC13.92□□□□□ -0.18
LdlrP35951 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LdlrP35951 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC13.92□□□□□ -0.18
LdlrP35951 Gm27430-201ENSMUST00000184585 107 ntBASIC13.92□□□□□ -0.18
LdlrP35951 Gm44333-201ENSMUST00000197168 107 ntBASIC13.92□□□□□ -0.18
LdlrP35951 Klk2-ps-201ENSMUST00000205342 571 ntBASIC13.92□□□□□ -0.18
LdlrP35951 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC13.92□□□□□ -0.18
LdlrP35951 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC13.92□□□□□ -0.18
LdlrP35951 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC13.92□□□□□ -0.18
LdlrP35951 AC123645.1-201ENSMUST00000228469 605 ntBASIC13.92□□□□□ -0.18
LdlrP35951 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms