Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Foxa1P35582 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Foxa1P35582 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Foxa1P35582 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Foxa1P35582 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Foxa1P35582 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
Foxa1P35582 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Foxa1P35582 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Foxa1P35582 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Foxa1P35582 Ksr1-207ENSMUST00000226282 5260 ntBASIC12.94□□□□□ -0.34
Foxa1P35582 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Foxa1P35582 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Foxa1P35582 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Foxa1P35582 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Foxa1P35582 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Foxa1P35582 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Foxa1P35582 Gm15393-201ENSMUST00000120499 219 ntBASIC12.94□□□□□ -0.34
Foxa1P35582 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Foxa1P35582 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC12.94□□□□□ -0.34
Foxa1P35582 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Foxa1P35582 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC12.94□□□□□ -0.34
Foxa1P35582 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Foxa1P35582 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Foxa1P35582 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC12.94□□□□□ -0.34
Foxa1P35582 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Foxa1P35582 AC153872.1-201ENSMUST00000199539 128 ntBASIC12.94□□□□□ -0.34
Foxa1P35582 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC12.94□□□□□ -0.34
Foxa1P35582 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Foxa1P35582 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Foxa1P35582 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Foxa1P35582 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Foxa1P35582 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Foxa1P35582 Gm12020-201ENSMUST00000119030 2042 ntBASIC12.94□□□□□ -0.34
Foxa1P35582 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Foxa1P35582 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Foxa1P35582 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC12.94□□□□□ -0.34
Foxa1P35582 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Foxa1P35582 AC124751.1-201ENSMUST00000222716 1408 ntBASIC12.94□□□□□ -0.34
Foxa1P35582 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC12.94□□□□□ -0.34
Foxa1P35582 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Foxa1P35582 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Foxa1P35582 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Foxa1P35582 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Foxa1P35582 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Foxa1P35582 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Foxa1P35582 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Foxa1P35582 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Foxa1P35582 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Foxa1P35582 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Foxa1P35582 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Foxa1P35582 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Foxa1P35582 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Foxa1P35582 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Foxa1P35582 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Foxa1P35582 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Foxa1P35582 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Foxa1P35582 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Foxa1P35582 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Foxa1P35582 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Foxa1P35582 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Foxa1P35582 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Foxa1P35582 Gm4875-201ENSMUST00000118257 786 ntBASIC12.93□□□□□ -0.34
Foxa1P35582 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Foxa1P35582 Mir7023-201ENSMUST00000185093 64 ntBASIC12.93□□□□□ -0.34
Foxa1P35582 Gm21470-201ENSMUST00000187680 696 ntBASIC12.93□□□□□ -0.34
Foxa1P35582 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC12.93□□□□□ -0.34
Foxa1P35582 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC12.93□□□□□ -0.34
Foxa1P35582 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC12.93□□□□□ -0.34
Foxa1P35582 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Foxa1P35582 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Foxa1P35582 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Foxa1P35582 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Foxa1P35582 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Foxa1P35582 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
Foxa1P35582 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Foxa1P35582 AC114543.1-201ENSMUST00000226451 1558 ntBASIC12.93□□□□□ -0.34
Foxa1P35582 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Foxa1P35582 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Foxa1P35582 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Foxa1P35582 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Foxa1P35582 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Foxa1P35582 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Foxa1P35582 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Foxa1P35582 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Foxa1P35582 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Foxa1P35582 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Foxa1P35582 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Foxa1P35582 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Foxa1P35582 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Foxa1P35582 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Foxa1P35582 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Foxa1P35582 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Foxa1P35582 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Foxa1P35582 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Foxa1P35582 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
Foxa1P35582 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC12.92□□□□□ -0.34
Foxa1P35582 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC12.92□□□□□ -0.34
Foxa1P35582 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Foxa1P35582 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Foxa1P35582 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms