Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Mmp3P28862 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Mmp3P28862 Gm15824-201ENSMUST00000119516 955 ntBASIC14.94□□□□□ -0.02
Mmp3P28862 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Mmp3P28862 Gm14730-201ENSMUST00000122378 1045 ntBASIC14.94□□□□□ -0.02
Mmp3P28862 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Mmp3P28862 Gm7498-201ENSMUST00000203282 1084 ntBASIC14.94□□□□□ -0.02
Mmp3P28862 Gm44719-201ENSMUST00000206404 149 ntBASIC14.94□□□□□ -0.02
Mmp3P28862 Gm7067-201ENSMUST00000207698 1249 ntBASIC14.94□□□□□ -0.02
Mmp3P28862 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Mmp3P28862 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Mmp3P28862 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC14.94□□□□□ -0.02
Mmp3P28862 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC14.94□□□□□ -0.02
Mmp3P28862 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Mmp3P28862 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Mmp3P28862 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Mmp3P28862 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.94□□□□□ -0.02
Mmp3P28862 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Mmp3P28862 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Mmp3P28862 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Mmp3P28862 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Mmp3P28862 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Mmp3P28862 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Mmp3P28862 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Mmp3P28862 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Mmp3P28862 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Mmp3P28862 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Mmp3P28862 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Mmp3P28862 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Mmp3P28862 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Mmp3P28862 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Mmp3P28862 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Mmp3P28862 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Mmp3P28862 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Mmp3P28862 Gm5303-201ENSMUST00000117943 1252 ntBASIC14.93□□□□□ -0.02
Mmp3P28862 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC14.93□□□□□ -0.02
Mmp3P28862 Mir1894-201ENSMUST00000122802 81 ntBASIC14.93□□□□□ -0.02
Mmp3P28862 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC14.93□□□□□ -0.02
Mmp3P28862 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Mmp3P28862 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC14.93□□□□□ -0.02
Mmp3P28862 Gm5069-202ENSMUST00000192714 1011 ntBASIC14.93□□□□□ -0.02
Mmp3P28862 AC125117.1-201ENSMUST00000228121 468 ntBASIC14.93□□□□□ -0.02
Mmp3P28862 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Mmp3P28862 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Mmp3P28862 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Mmp3P28862 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Mmp3P28862 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Mmp3P28862 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Mmp3P28862 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Mmp3P28862 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Mmp3P28862 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
Mmp3P28862 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Mmp3P28862 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Mmp3P28862 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Mmp3P28862 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Mmp3P28862 AL645783.1-201ENSMUST00000221416 1832 ntBASIC14.92□□□□□ -0.02
Mmp3P28862 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Mmp3P28862 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Mmp3P28862 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Mmp3P28862 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Mmp3P28862 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Mmp3P28862 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Mmp3P28862 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC14.92□□□□□ -0.02
Mmp3P28862 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC14.92□□□□□ -0.02
Mmp3P28862 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC14.92□□□□□ -0.02
Mmp3P28862 Gm27839-201ENSMUST00000184242 106 ntBASIC14.92□□□□□ -0.02
Mmp3P28862 Mir7085-201ENSMUST00000184353 66 ntBASIC14.92□□□□□ -0.02
Mmp3P28862 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC14.92□□□□□ -0.02
Mmp3P28862 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Mmp3P28862 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC14.92□□□□□ -0.02
Mmp3P28862 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Mmp3P28862 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Mmp3P28862 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Mmp3P28862 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Mmp3P28862 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Mmp3P28862 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Mmp3P28862 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Mmp3P28862 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Mmp3P28862 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Mmp3P28862 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Mmp3P28862 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Mmp3P28862 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC14.92□□□□□ -0.02
Mmp3P28862 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Mmp3P28862 Gm8775-201ENSMUST00000170943 1327 ntBASIC14.92□□□□□ -0.02
Mmp3P28862 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Mmp3P28862 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Mmp3P28862 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Mmp3P28862 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Mmp3P28862 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Mmp3P28862 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Mmp3P28862 Gm37812-201ENSMUST00000195216 2475 ntBASIC14.91□□□□□ -0.02
Mmp3P28862 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Mmp3P28862 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.91□□□□□ -0.02
Mmp3P28862 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.91□□□□□ -0.02
Mmp3P28862 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC14.91□□□□□ -0.02
Mmp3P28862 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Mmp3P28862 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Mmp3P28862 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Mmp3P28862 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Mmp3P28862 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms