Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC12.94□□□□□ -0.34
Cd40lgP27548 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cd40lgP27548 Gm27622-201ENSMUST00000183779 60 ntBASIC12.94□□□□□ -0.34
Cd40lgP27548 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC12.94□□□□□ -0.34
Cd40lgP27548 Gm37230-201ENSMUST00000194491 818 ntBASIC12.94□□□□□ -0.34
Cd40lgP27548 AC154621.1-201ENSMUST00000226155 1119 ntBASIC12.94□□□□□ -0.34
Cd40lgP27548 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cd40lgP27548 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cd40lgP27548 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cd40lgP27548 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cd40lgP27548 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Cd40lgP27548 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.94□□□□□ -0.34
Cd40lgP27548 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Cd40lgP27548 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC12.94□□□□□ -0.34
Cd40lgP27548 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cd40lgP27548 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cd40lgP27548 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cd40lgP27548 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cd40lgP27548 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cd40lgP27548 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cd40lgP27548 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cd40lgP27548 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cd40lgP27548 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC12.94□□□□□ -0.34
Cd40lgP27548 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.94□□□□□ -0.34
Cd40lgP27548 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cd40lgP27548 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cd40lgP27548 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cd40lgP27548 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC12.93□□□□□ -0.34
Cd40lgP27548 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cd40lgP27548 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cd40lgP27548 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cd40lgP27548 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cd40lgP27548 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cd40lgP27548 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cd40lgP27548 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Cd40lgP27548 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC12.93□□□□□ -0.34
Cd40lgP27548 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cd40lgP27548 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cd40lgP27548 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cd40lgP27548 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC12.93□□□□□ -0.34
Cd40lgP27548 Gm13823-201ENSMUST00000119930 345 ntBASIC12.93□□□□□ -0.34
Cd40lgP27548 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cd40lgP27548 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cd40lgP27548 Gm18766-201ENSMUST00000189811 808 ntBASIC12.93□□□□□ -0.34
Cd40lgP27548 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cd40lgP27548 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cd40lgP27548 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Cd40lgP27548 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cd40lgP27548 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.93□□□□□ -0.34
Cd40lgP27548 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cd40lgP27548 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cd40lgP27548 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Cd40lgP27548 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Cd40lgP27548 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cd40lgP27548 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC12.93□□□□□ -0.34
Cd40lgP27548 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cd40lgP27548 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cd40lgP27548 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Cd40lgP27548 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Cd40lgP27548 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC12.92□□□□□ -0.34
Cd40lgP27548 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cd40lgP27548 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cd40lgP27548 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cd40lgP27548 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cd40lgP27548 Gm24543-201ENSMUST00000103867 82 ntBASIC12.92□□□□□ -0.34
Cd40lgP27548 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cd40lgP27548 Gm5566-201ENSMUST00000116118 459 ntBASIC12.92□□□□□ -0.34
Cd40lgP27548 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC12.92□□□□□ -0.34
Cd40lgP27548 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Cd40lgP27548 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cd40lgP27548 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC12.92□□□□□ -0.34
Cd40lgP27548 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cd40lgP27548 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cd40lgP27548 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cd40lgP27548 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cd40lgP27548 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cd40lgP27548 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Cd40lgP27548 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cd40lgP27548 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cd40lgP27548 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Cd40lgP27548 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cd40lgP27548 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cd40lgP27548 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cd40lgP27548 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cd40lgP27548 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cd40lgP27548 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cd40lgP27548 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cd40lgP27548 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC12.91□□□□□ -0.34
Cd40lgP27548 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cd40lgP27548 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cd40lgP27548 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cd40lgP27548 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC12.91□□□□□ -0.34
Cd40lgP27548 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cd40lgP27548 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC12.91□□□□□ -0.34
Cd40lgP27548 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Cd40lgP27548 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cd40lgP27548 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cd40lgP27548 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cd40lgP27548 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cd40lgP27548 Gm38197-201ENSMUST00000192320 2122 ntBASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms