Protein–RNA interactions for Protein: P23463

Hoxd8, Homeobox protein Hox-D8, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd8P23463 Gm12070-201ENSMUST00000119551 1002 ntBASIC14.36□□□□□ -0.11
Hoxd8P23463 Gm12671-201ENSMUST00000119978 1002 ntBASIC14.36□□□□□ -0.11
Hoxd8P23463 Gm13292-201ENSMUST00000120014 1000 ntBASIC14.36□□□□□ -0.11
Hoxd8P23463 Gm12403-201ENSMUST00000121384 959 ntBASIC14.36□□□□□ -0.11
Hoxd8P23463 4931428L18Rik-202ENSMUST00000135245 889 ntAPPRIS P5 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxd8P23463 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC14.36□□□□□ -0.11
Hoxd8P23463 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC14.36□□□□□ -0.11
Hoxd8P23463 Gm10359-201ENSMUST00000180167 1002 ntBASIC14.36□□□□□ -0.11
Hoxd8P23463 Gm12033-201ENSMUST00000180654 1002 ntBASIC14.36□□□□□ -0.11
Hoxd8P23463 Gm5559-201ENSMUST00000180755 1002 ntBASIC14.36□□□□□ -0.11
Hoxd8P23463 Gm4335-201ENSMUST00000182581 1004 ntBASIC14.36□□□□□ -0.11
Hoxd8P23463 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC14.36□□□□□ -0.11
Hoxd8P23463 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
Hoxd8P23463 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxd8P23463 AC122459.1-201ENSMUST00000228373 885 ntBASIC14.36□□□□□ -0.11
Hoxd8P23463 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxd8P23463 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxd8P23463 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Hoxd8P23463 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxd8P23463 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxd8P23463 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC14.36□□□□□ -0.11
Hoxd8P23463 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Hoxd8P23463 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxd8P23463 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Hoxd8P23463 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxd8P23463 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxd8P23463 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxd8P23463 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxd8P23463 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxd8P23463 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Hoxd8P23463 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxd8P23463 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxd8P23463 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Hoxd8P23463 Gm9755-201ENSMUST00000032981 1356 ntBASIC14.35□□□□□ -0.11
Hoxd8P23463 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC14.35□□□□□ -0.11
Hoxd8P23463 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxd8P23463 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxd8P23463 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC14.35□□□□□ -0.11
Hoxd8P23463 Gm7553-201ENSMUST00000185805 1426 ntBASIC14.35□□□□□ -0.11
Hoxd8P23463 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Hoxd8P23463 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxd8P23463 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Hoxd8P23463 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC14.35□□□□□ -0.11
Hoxd8P23463 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxd8P23463 Mir1247-201ENSMUST00000116706 82 ntBASIC14.35□□□□□ -0.11
Hoxd8P23463 Gm13392-201ENSMUST00000117708 150 ntBASIC14.35□□□□□ -0.11
Hoxd8P23463 Gm12384-201ENSMUST00000119228 919 ntBASIC14.35□□□□□ -0.11
Hoxd8P23463 Gm22331-201ENSMUST00000158066 136 ntBASIC14.35□□□□□ -0.11
Hoxd8P23463 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC14.35□□□□□ -0.11
Hoxd8P23463 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxd8P23463 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxd8P23463 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC14.35□□□□□ -0.11
Hoxd8P23463 Gm3786-201ENSMUST00000202659 378 ntBASIC14.35□□□□□ -0.11
Hoxd8P23463 Gm9299-201ENSMUST00000206392 1140 ntBASIC14.35□□□□□ -0.11
Hoxd8P23463 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC14.35□□□□□ -0.11
Hoxd8P23463 AC126253.1-201ENSMUST00000227974 824 ntBASIC14.35□□□□□ -0.11
Hoxd8P23463 AC140451.2-201ENSMUST00000228030 664 ntBASIC14.35□□□□□ -0.11
Hoxd8P23463 Itm2b-204ENSMUST00000228637 783 ntBASIC14.35□□□□□ -0.11
Hoxd8P23463 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxd8P23463 Olfr173-201ENSMUST00000049940 1164 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Hoxd8P23463 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxd8P23463 Ptprs-211ENSMUST00000223859 5588 ntBASIC14.35□□□□□ -0.11
Hoxd8P23463 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxd8P23463 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
Hoxd8P23463 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Hoxd8P23463 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxd8P23463 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxd8P23463 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC14.35□□□□□ -0.11
Hoxd8P23463 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxd8P23463 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Hoxd8P23463 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Hoxd8P23463 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxd8P23463 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC14.34□□□□□ -0.11
Hoxd8P23463 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxd8P23463 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxd8P23463 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC14.34□□□□□ -0.11
Hoxd8P23463 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxd8P23463 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxd8P23463 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxd8P23463 Gm16177-201ENSMUST00000120728 718 ntBASIC14.34□□□□□ -0.11
Hoxd8P23463 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Hoxd8P23463 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Hoxd8P23463 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Hoxd8P23463 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC14.34□□□□□ -0.11
Hoxd8P23463 Gm4959-201ENSMUST00000197271 1044 ntBASIC14.34□□□□□ -0.11
Hoxd8P23463 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC14.34□□□□□ -0.11
Hoxd8P23463 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxd8P23463 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxd8P23463 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxd8P23463 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxd8P23463 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxd8P23463 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxd8P23463 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxd8P23463 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxd8P23463 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxd8P23463 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxd8P23463 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxd8P23463 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hoxd8P23463 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Hoxd8P23463 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms