Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clk1P22518 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Clk1P22518 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Clk1P22518 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Clk1P22518 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC13.09□□□□□ -0.31
Clk1P22518 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC13.09□□□□□ -0.31
Clk1P22518 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clk1P22518 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clk1P22518 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clk1P22518 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clk1P22518 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC13.09□□□□□ -0.31
Clk1P22518 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Clk1P22518 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Clk1P22518 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Clk1P22518 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.31
Clk1P22518 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Clk1P22518 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Clk1P22518 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Clk1P22518 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Clk1P22518 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.08□□□□□ -0.32
Clk1P22518 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Clk1P22518 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
Clk1P22518 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Clk1P22518 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC13.08□□□□□ -0.32
Clk1P22518 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC13.08□□□□□ -0.32
Clk1P22518 Gm22065-201ENSMUST00000103753 110 ntBASIC13.08□□□□□ -0.32
Clk1P22518 Gm22066-201ENSMUST00000103761 110 ntBASIC13.08□□□□□ -0.32
Clk1P22518 Gm24932-201ENSMUST00000103763 110 ntBASIC13.08□□□□□ -0.32
Clk1P22518 Gm24115-201ENSMUST00000103799 110 ntBASIC13.08□□□□□ -0.32
Clk1P22518 Gm22190-201ENSMUST00000103827 110 ntBASIC13.08□□□□□ -0.32
Clk1P22518 Gm22191-201ENSMUST00000103831 110 ntBASIC13.08□□□□□ -0.32
Clk1P22518 Gm24721-201ENSMUST00000103849 110 ntBASIC13.08□□□□□ -0.32
Clk1P22518 Gm28018-201ENSMUST00000103869 110 ntBASIC13.08□□□□□ -0.32
Clk1P22518 Gm26399-201ENSMUST00000103937 110 ntBASIC13.08□□□□□ -0.32
Clk1P22518 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
Clk1P22518 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Clk1P22518 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Clk1P22518 Gm25349-201ENSMUST00000177728 110 ntBASIC13.08□□□□□ -0.32
Clk1P22518 Gm23616-201ENSMUST00000177797 110 ntBASIC13.08□□□□□ -0.32
Clk1P22518 Gm25871-201ENSMUST00000177816 110 ntBASIC13.08□□□□□ -0.32
Clk1P22518 Gm24752-201ENSMUST00000178240 110 ntBASIC13.08□□□□□ -0.32
Clk1P22518 Gm24496-201ENSMUST00000178287 110 ntBASIC13.08□□□□□ -0.32
Clk1P22518 Gm25649-201ENSMUST00000178476 110 ntBASIC13.08□□□□□ -0.32
Clk1P22518 Gm25548-201ENSMUST00000178681 110 ntBASIC13.08□□□□□ -0.32
Clk1P22518 Gm23147-201ENSMUST00000178841 110 ntBASIC13.08□□□□□ -0.32
Clk1P22518 Gm26095-201ENSMUST00000179270 110 ntBASIC13.08□□□□□ -0.32
Clk1P22518 Gm22171-201ENSMUST00000179283 110 ntBASIC13.08□□□□□ -0.32
Clk1P22518 Gm23936-201ENSMUST00000179354 110 ntBASIC13.08□□□□□ -0.32
Clk1P22518 Gm22619-201ENSMUST00000179516 110 ntBASIC13.08□□□□□ -0.32
Clk1P22518 Gm25255-201ENSMUST00000179579 110 ntBASIC13.08□□□□□ -0.32
Clk1P22518 Gm24755-201ENSMUST00000179691 110 ntBASIC13.08□□□□□ -0.32
Clk1P22518 Gm26506-201ENSMUST00000179692 110 ntBASIC13.08□□□□□ -0.32
Clk1P22518 Gm25086-201ENSMUST00000179931 110 ntBASIC13.08□□□□□ -0.32
Clk1P22518 Gm23243-201ENSMUST00000180047 110 ntBASIC13.08□□□□□ -0.32
Clk1P22518 Gm24659-201ENSMUST00000180212 110 ntBASIC13.08□□□□□ -0.32
Clk1P22518 Gm24169-201ENSMUST00000180244 110 ntBASIC13.08□□□□□ -0.32
Clk1P22518 Gm23689-201ENSMUST00000180354 110 ntBASIC13.08□□□□□ -0.32
Clk1P22518 Gm27359-201ENSMUST00000184153 110 ntBASIC13.08□□□□□ -0.32
Clk1P22518 Gm27785-201ENSMUST00000184268 110 ntBASIC13.08□□□□□ -0.32
Clk1P22518 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Clk1P22518 Gm27466-201ENSMUST00000184396 110 ntBASIC13.08□□□□□ -0.32
Clk1P22518 Gm27703-201ENSMUST00000184836 110 ntBASIC13.08□□□□□ -0.32
Clk1P22518 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC13.08□□□□□ -0.32
Clk1P22518 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Clk1P22518 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Clk1P22518 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Clk1P22518 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC13.08□□□□□ -0.32
Clk1P22518 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Clk1P22518 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Clk1P22518 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Clk1P22518 Gm6756-201ENSMUST00000180647 1620 ntBASIC13.08□□□□□ -0.32
Clk1P22518 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Clk1P22518 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Clk1P22518 Gm37297-201ENSMUST00000192974 2384 ntBASIC13.08□□□□□ -0.32
Clk1P22518 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Clk1P22518 Gm6018-201ENSMUST00000216090 1306 ntBASIC13.08□□□□□ -0.32
Clk1P22518 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
Clk1P22518 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Clk1P22518 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Clk1P22518 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Clk1P22518 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Clk1P22518 AC129336.1-201ENSMUST00000220224 2277 ntBASIC13.08□□□□□ -0.32
Clk1P22518 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Clk1P22518 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Clk1P22518 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Clk1P22518 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Clk1P22518 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Clk1P22518 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Clk1P22518 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Clk1P22518 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Clk1P22518 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Clk1P22518 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Clk1P22518 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Clk1P22518 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Clk1P22518 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
Clk1P22518 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Clk1P22518 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Clk1P22518 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Clk1P22518 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Clk1P22518 Gm14822-201ENSMUST00000122247 291 ntBASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms