Protein–RNA interactions for Protein: P09925

Surf1, Surfeit locus protein 1, mousemouse

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Surf1P09925 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Surf1P09925 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Surf1P09925 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Surf1P09925 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Surf1P09925 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC15.82■□□□□ 0.12
Surf1P09925 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Surf1P09925 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
Surf1P09925 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Surf1P09925 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
Surf1P09925 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Surf1P09925 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Surf1P09925 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Surf1P09925 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Surf1P09925 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Surf1P09925 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Surf1P09925 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Surf1P09925 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Surf1P09925 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Surf1P09925 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Surf1P09925 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Surf1P09925 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Surf1P09925 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC15.81■□□□□ 0.12
Surf1P09925 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Surf1P09925 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Surf1P09925 Gm27631-201ENSMUST00000184163 466 ntBASIC15.81■□□□□ 0.12
Surf1P09925 Mir7023-201ENSMUST00000185093 64 ntBASIC15.81■□□□□ 0.12
Surf1P09925 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Surf1P09925 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC15.81■□□□□ 0.12
Surf1P09925 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Surf1P09925 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Surf1P09925 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC15.81■□□□□ 0.12
Surf1P09925 Gm6888-201ENSMUST00000221983 706 ntBASIC15.81■□□□□ 0.12
Surf1P09925 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Surf1P09925 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Surf1P09925 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Surf1P09925 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Surf1P09925 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Surf1P09925 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Surf1P09925 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Surf1P09925 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC15.81■□□□□ 0.12
Surf1P09925 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Surf1P09925 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Surf1P09925 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Surf1P09925 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Surf1P09925 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
Surf1P09925 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Surf1P09925 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Surf1P09925 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Surf1P09925 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Surf1P09925 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Surf1P09925 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Surf1P09925 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Surf1P09925 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Surf1P09925 Gm14767-201ENSMUST00000121559 586 ntBASIC15.8■□□□□ 0.12
Surf1P09925 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Surf1P09925 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Surf1P09925 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Surf1P09925 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Surf1P09925 Gm27533-201ENSMUST00000183800 152 ntBASIC15.8■□□□□ 0.12
Surf1P09925 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Surf1P09925 Gm45453-201ENSMUST00000211758 853 ntBASIC15.8■□□□□ 0.12
Surf1P09925 AC149588.3-201ENSMUST00000227515 150 ntBASIC15.8■□□□□ 0.12
Surf1P09925 Rbfox2-208ENSMUST00000227930 1218 ntBASIC15.8■□□□□ 0.12
Surf1P09925 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Surf1P09925 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Surf1P09925 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Surf1P09925 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Surf1P09925 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Surf1P09925 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Surf1P09925 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC15.8■□□□□ 0.12
Surf1P09925 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Surf1P09925 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Surf1P09925 Acot6-202ENSMUST00000222921 3622 ntBASIC15.8■□□□□ 0.12
Surf1P09925 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC15.8■□□□□ 0.12
Surf1P09925 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Surf1P09925 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Surf1P09925 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Surf1P09925 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Surf1P09925 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Surf1P09925 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Surf1P09925 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC15.79■□□□□ 0.12
Surf1P09925 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Surf1P09925 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Surf1P09925 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Surf1P09925 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Surf1P09925 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Surf1P09925 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Surf1P09925 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Surf1P09925 Gm13223-201ENSMUST00000118609 747 ntBASIC15.79■□□□□ 0.12
Surf1P09925 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Surf1P09925 AA619741-201ENSMUST00000195095 646 ntBASIC15.79■□□□□ 0.12
Surf1P09925 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC15.79■□□□□ 0.12
Surf1P09925 AC155729.1-201ENSMUST00000227758 544 ntBASIC15.79■□□□□ 0.12
Surf1P09925 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Surf1P09925 Grk6-205ENSMUST00000224653 2976 ntBASIC15.79■□□□□ 0.12
Surf1P09925 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Surf1P09925 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Surf1P09925 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Surf1P09925 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Surf1P09925 Gm42928-201ENSMUST00000197338 3339 ntBASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms