Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Hoxa4P06798 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Hoxa4P06798 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Hoxa4P06798 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Hoxa4P06798 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Hoxa4P06798 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC13.75□□□□□ -0.21
Hoxa4P06798 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Hoxa4P06798 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Hoxa4P06798 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Hoxa4P06798 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Hoxa4P06798 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Hoxa4P06798 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC13.75□□□□□ -0.21
Hoxa4P06798 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Hoxa4P06798 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Hoxa4P06798 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Hoxa4P06798 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Hoxa4P06798 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC13.75□□□□□ -0.21
Hoxa4P06798 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC13.75□□□□□ -0.21
Hoxa4P06798 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Hoxa4P06798 Gm2423-201ENSMUST00000074863 733 ntBASIC13.75□□□□□ -0.21
Hoxa4P06798 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Hoxa4P06798 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Hoxa4P06798 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC13.75□□□□□ -0.21
Hoxa4P06798 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Hoxa4P06798 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Hoxa4P06798 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Hoxa4P06798 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Hoxa4P06798 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Hoxa4P06798 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Hoxa4P06798 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.21
Hoxa4P06798 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Hoxa4P06798 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Hoxa4P06798 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hoxa4P06798 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Hoxa4P06798 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hoxa4P06798 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hoxa4P06798 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hoxa4P06798 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hoxa4P06798 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hoxa4P06798 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Hoxa4P06798 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hoxa4P06798 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hoxa4P06798 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hoxa4P06798 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Hoxa4P06798 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Hoxa4P06798 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Hoxa4P06798 Gm45605-201ENSMUST00000210265 4269 ntBASIC13.74□□□□□ -0.21
Hoxa4P06798 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC13.74□□□□□ -0.21
Hoxa4P06798 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC13.74□□□□□ -0.21
Hoxa4P06798 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Hoxa4P06798 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
Hoxa4P06798 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC13.74□□□□□ -0.21
Hoxa4P06798 Gm28631-201ENSMUST00000190740 334 ntBASIC13.74□□□□□ -0.21
Hoxa4P06798 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC13.74□□□□□ -0.21
Hoxa4P06798 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC13.74□□□□□ -0.21
Hoxa4P06798 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Hoxa4P06798 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Hoxa4P06798 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Hoxa4P06798 Gm19220-201ENSMUST00000222682 803 ntBASIC13.74□□□□□ -0.21
Hoxa4P06798 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Hoxa4P06798 CT025535.1-201ENSMUST00000227172 491 ntBASIC13.74□□□□□ -0.21
Hoxa4P06798 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hoxa4P06798 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC13.74□□□□□ -0.21
Hoxa4P06798 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hoxa4P06798 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hoxa4P06798 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Hoxa4P06798 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Hoxa4P06798 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hoxa4P06798 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hoxa4P06798 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hoxa4P06798 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hoxa4P06798 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hoxa4P06798 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hoxa4P06798 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Hoxa4P06798 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hoxa4P06798 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hoxa4P06798 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Hoxa4P06798 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hoxa4P06798 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Hoxa4P06798 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Hoxa4P06798 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hoxa4P06798 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Hoxa4P06798 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hoxa4P06798 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC13.73□□□□□ -0.21
Hoxa4P06798 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Hoxa4P06798 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hoxa4P06798 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hoxa4P06798 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hoxa4P06798 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hoxa4P06798 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hoxa4P06798 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hoxa4P06798 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hoxa4P06798 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hoxa4P06798 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hoxa4P06798 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hoxa4P06798 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC13.73□□□□□ -0.21
Hoxa4P06798 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Hoxa4P06798 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hoxa4P06798 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hoxa4P06798 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms