Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
P04224 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
P04224 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
P04224 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
P04224 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC12.29□□□□□ -0.44
P04224 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
P04224 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
P04224 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
P04224 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC12.29□□□□□ -0.44
P04224 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
P04224 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
P04224 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
P04224 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
P04224 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
P04224 Gm18856-201ENSMUST00000178096 1374 ntBASIC12.29□□□□□ -0.44
P04224 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
P04224 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
P04224 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
P04224 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
P04224 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
P04224 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC12.28□□□□□ -0.44
P04224 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
P04224 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
P04224 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
P04224 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
P04224 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
P04224 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
P04224 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
P04224 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
P04224 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
P04224 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
P04224 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
P04224 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.28□□□□□ -0.44
P04224 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
P04224 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
P04224 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
P04224 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
P04224 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
P04224 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
P04224 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC12.28□□□□□ -0.44
P04224 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC12.28□□□□□ -0.44
P04224 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
P04224 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC12.28□□□□□ -0.44
P04224 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
P04224 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
P04224 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
P04224 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
P04224 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
P04224 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
P04224 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
P04224 AC130669.1-201ENSMUST00000228537 1672 ntBASIC12.28□□□□□ -0.44
P04224 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
P04224 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
P04224 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
P04224 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
P04224 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
P04224 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
P04224 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
P04224 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
P04224 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
P04224 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
P04224 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
P04224 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
P04224 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
P04224 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
P04224 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
P04224 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
P04224 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
P04224 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC12.27□□□□□ -0.44
P04224 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
P04224 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
P04224 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
P04224 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
P04224 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
P04224 Gm15173-201ENSMUST00000122049 433 ntBASIC12.27□□□□□ -0.45
P04224 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
P04224 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC12.27□□□□□ -0.45
P04224 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
P04224 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
P04224 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC12.27□□□□□ -0.45
P04224 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC12.27□□□□□ -0.45
P04224 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
P04224 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
P04224 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
P04224 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
P04224 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
P04224 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
P04224 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
P04224 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
P04224 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC12.27□□□□□ -0.45
P04224 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
P04224 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
P04224 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC12.27□□□□□ -0.45
P04224 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
P04224 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
P04224 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.26□□□□□ -0.45
P04224 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
P04224 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
P04224 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
P04224 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms