Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
P01852 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
P01852 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
P01852 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
P01852 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
P01852 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
P01852 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
P01852 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
P01852 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
P01852 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
P01852 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
P01852 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
P01852 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
P01852 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
P01852 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
P01852 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
P01852 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
P01852 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
P01852 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
P01852 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
P01852 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
P01852 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
P01852 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
P01852 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
P01852 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
P01852 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
P01852 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
P01852 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
P01852 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC12.81□□□□□ -0.36
P01852 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
P01852 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
P01852 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
P01852 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
P01852 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
P01852 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC12.81□□□□□ -0.36
P01852 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
P01852 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
P01852 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC12.81□□□□□ -0.36
P01852 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
P01852 Gm12151-201ENSMUST00000121374 290 ntBASIC12.81□□□□□ -0.36
P01852 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
P01852 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
P01852 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
P01852 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
P01852 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
P01852 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
P01852 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
P01852 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
P01852 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
P01852 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
P01852 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
P01852 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
P01852 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
P01852 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
P01852 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
P01852 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
P01852 AC121805.2-201ENSMUST00000218808 2538 ntBASIC12.81□□□□□ -0.36
P01852 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
P01852 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P01852 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P01852 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
P01852 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
P01852 Gm45630-201ENSMUST00000210243 1911 ntBASIC12.8□□□□□ -0.36
P01852 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
P01852 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P01852 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P01852 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
P01852 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P01852 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P01852 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P01852 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
P01852 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P01852 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
P01852 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P01852 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P01852 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P01852 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC12.8□□□□□ -0.36
P01852 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC12.8□□□□□ -0.36
P01852 Ighv1-25-201ENSMUST00000195638 345 ntBASIC12.8□□□□□ -0.36
P01852 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
P01852 Gm6916-202ENSMUST00000205523 195 ntBASIC12.8□□□□□ -0.36
P01852 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P01852 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC12.8□□□□□ -0.36
P01852 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P01852 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
P01852 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P01852 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
P01852 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
P01852 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC12.8□□□□□ -0.36
P01852 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P01852 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P01852 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P01852 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
P01852 Gm42769-201ENSMUST00000198576 1659 ntBASIC12.8□□□□□ -0.36
P01852 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
P01852 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
P01852 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
P01852 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
P01852 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
P01852 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms