Protein–RNA interactions for Protein: P01572

Ifna1, Interferon alpha-1, mousemouse

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ifna1P01572 CT025610.1-201ENSMUST00000224552 1786 ntBASIC11.8□□□□□ -0.52
Ifna1P01572 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
Ifna1P01572 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ifna1P01572 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ifna1P01572 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC11.8□□□□□ -0.52
Ifna1P01572 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ifna1P01572 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ifna1P01572 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ifna1P01572 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ifna1P01572 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ifna1P01572 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ifna1P01572 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ifna1P01572 Gm9103-201ENSMUST00000119371 405 ntBASIC11.8□□□□□ -0.52
Ifna1P01572 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Ifna1P01572 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
Ifna1P01572 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
Ifna1P01572 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ifna1P01572 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC11.8□□□□□ -0.52
Ifna1P01572 Gm27301-201ENSMUST00000184012 127 ntBASIC11.8□□□□□ -0.52
Ifna1P01572 Gm43332-201ENSMUST00000202511 1044 ntBASIC11.8□□□□□ -0.52
Ifna1P01572 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC11.8□□□□□ -0.52
Ifna1P01572 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC11.8□□□□□ -0.52
Ifna1P01572 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ifna1P01572 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC11.8□□□□□ -0.52
Ifna1P01572 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ifna1P01572 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ifna1P01572 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ifna1P01572 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ifna1P01572 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Ifna1P01572 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ifna1P01572 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ifna1P01572 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ifna1P01572 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ifna1P01572 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ifna1P01572 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Ifna1P01572 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ifna1P01572 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ifna1P01572 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ifna1P01572 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ifna1P01572 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ifna1P01572 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ifna1P01572 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ifna1P01572 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ifna1P01572 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ifna1P01572 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ifna1P01572 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Ifna1P01572 Gm13410-201ENSMUST00000117058 1415 ntBASIC11.79□□□□□ -0.52
Ifna1P01572 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ifna1P01572 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ifna1P01572 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ifna1P01572 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ifna1P01572 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ifna1P01572 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ifna1P01572 Mypopos-202ENSMUST00000205975 2321 ntBASIC11.79□□□□□ -0.52
Ifna1P01572 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Ifna1P01572 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC11.79□□□□□ -0.52
Ifna1P01572 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ifna1P01572 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ifna1P01572 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ifna1P01572 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Ifna1P01572 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC11.79□□□□□ -0.52
Ifna1P01572 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ifna1P01572 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ifna1P01572 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Ifna1P01572 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ifna1P01572 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC11.79□□□□□ -0.52
Ifna1P01572 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ifna1P01572 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ifna1P01572 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
Ifna1P01572 Nudt18-203ENSMUST00000228768 1578 ntBASIC11.79□□□□□ -0.52
Ifna1P01572 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ifna1P01572 AC154262.2-201ENSMUST00000224310 2293 ntBASIC11.79□□□□□ -0.52
Ifna1P01572 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ifna1P01572 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ifna1P01572 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ifna1P01572 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ifna1P01572 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ifna1P01572 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ifna1P01572 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ifna1P01572 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ifna1P01572 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ifna1P01572 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ifna1P01572 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC11.78□□□□□ -0.52
Ifna1P01572 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
Ifna1P01572 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ifna1P01572 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ifna1P01572 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ifna1P01572 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ifna1P01572 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ifna1P01572 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ifna1P01572 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ifna1P01572 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ifna1P01572 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC11.78□□□□□ -0.52
Ifna1P01572 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ifna1P01572 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ifna1P01572 AC084391.1-201ENSMUST00000200651 141 ntBASIC11.78□□□□□ -0.52
Ifna1P01572 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ifna1P01572 Klk2-ps-201ENSMUST00000205342 571 ntBASIC11.78□□□□□ -0.52
Ifna1P01572 AC123645.1-201ENSMUST00000228469 605 ntBASIC11.78□□□□□ -0.52
Ifna1P01572 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms