Protein–RNA interactions for Protein: O88879

Apaf1, Apoptotic protease-activating factor 1, mousemouse

Predictions only

Length 1,249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apaf1O88879 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Apaf1O88879 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
Apaf1O88879 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Apaf1O88879 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC18.16■□□□□ 0.5
Apaf1O88879 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Apaf1O88879 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Apaf1O88879 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Apaf1O88879 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Apaf1O88879 Gm28631-201ENSMUST00000190740 334 ntBASIC18.16■□□□□ 0.5
Apaf1O88879 Gm5279-201ENSMUST00000199575 745 ntBASIC18.16■□□□□ 0.5
Apaf1O88879 Gm4971-201ENSMUST00000205991 1108 ntBASIC18.16■□□□□ 0.5
Apaf1O88879 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC18.16■□□□□ 0.5
Apaf1O88879 AC149294.4-201ENSMUST00000227870 882 ntBASIC18.16■□□□□ 0.5
Apaf1O88879 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Apaf1O88879 Gm45760-201ENSMUST00000212190 1782 ntBASIC18.16■□□□□ 0.5
Apaf1O88879 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Apaf1O88879 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Apaf1O88879 Gm38037-201ENSMUST00000192600 1624 ntBASIC18.16■□□□□ 0.5
Apaf1O88879 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
Apaf1O88879 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Apaf1O88879 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Apaf1O88879 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Apaf1O88879 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Apaf1O88879 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC18.15■□□□□ 0.5
Apaf1O88879 Zkscan14-203ENSMUST00000198959 2243 ntBASIC18.15■□□□□ 0.5
Apaf1O88879 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Apaf1O88879 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC18.15■□□□□ 0.5
Apaf1O88879 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Apaf1O88879 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Apaf1O88879 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC18.15■□□□□ 0.5
Apaf1O88879 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC18.15■□□□□ 0.5
Apaf1O88879 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC18.15■□□□□ 0.5
Apaf1O88879 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Apaf1O88879 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Apaf1O88879 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Apaf1O88879 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Apaf1O88879 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Apaf1O88879 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Apaf1O88879 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Apaf1O88879 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Apaf1O88879 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC18.15■□□□□ 0.5
Apaf1O88879 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Apaf1O88879 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Apaf1O88879 Gm5421-201ENSMUST00000181698 2354 ntBASIC18.15■□□□□ 0.5
Apaf1O88879 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Apaf1O88879 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Apaf1O88879 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Apaf1O88879 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Apaf1O88879 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Apaf1O88879 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Apaf1O88879 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Apaf1O88879 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC18.14■□□□□ 0.49
Apaf1O88879 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Apaf1O88879 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Apaf1O88879 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC18.14■□□□□ 0.49
Apaf1O88879 Ldha-ps-201ENSMUST00000119390 995 ntBASIC18.14■□□□□ 0.49
Apaf1O88879 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Apaf1O88879 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC18.14■□□□□ 0.49
Apaf1O88879 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC18.14■□□□□ 0.49
Apaf1O88879 Gm18905-201ENSMUST00000205454 928 ntBASIC18.14■□□□□ 0.49
Apaf1O88879 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Apaf1O88879 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Apaf1O88879 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Apaf1O88879 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Apaf1O88879 Gm10710-201ENSMUST00000047876 3971 ntBASIC18.14■□□□□ 0.49
Apaf1O88879 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Apaf1O88879 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Apaf1O88879 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC18.14■□□□□ 0.49
Apaf1O88879 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Apaf1O88879 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Apaf1O88879 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Apaf1O88879 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Apaf1O88879 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Apaf1O88879 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Apaf1O88879 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Apaf1O88879 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Apaf1O88879 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC18.13■□□□□ 0.49
Apaf1O88879 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Apaf1O88879 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Apaf1O88879 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Apaf1O88879 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Apaf1O88879 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Apaf1O88879 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC18.13■□□□□ 0.49
Apaf1O88879 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC18.13■□□□□ 0.49
Apaf1O88879 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Apaf1O88879 Gm3809-201ENSMUST00000180973 1006 ntBASIC18.13■□□□□ 0.49
Apaf1O88879 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Apaf1O88879 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC18.13■□□□□ 0.49
Apaf1O88879 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Apaf1O88879 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC18.13■□□□□ 0.49
Apaf1O88879 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Apaf1O88879 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Apaf1O88879 AC167013.2-201ENSMUST00000228520 2684 ntBASIC18.13■□□□□ 0.49
Apaf1O88879 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC18.13■□□□□ 0.49
Apaf1O88879 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Apaf1O88879 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Apaf1O88879 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Apaf1O88879 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC18.12■□□□□ 0.49
Apaf1O88879 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Apaf1O88879 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms