Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Matn3O35701 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Matn3O35701 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Matn3O35701 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Matn3O35701 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Matn3O35701 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Matn3O35701 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Matn3O35701 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Matn3O35701 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Matn3O35701 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Matn3O35701 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Matn3O35701 Mypopos-202ENSMUST00000205975 2321 ntBASIC12.71□□□□□ -0.37
Matn3O35701 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Matn3O35701 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Matn3O35701 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Matn3O35701 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC12.71□□□□□ -0.37
Matn3O35701 AC115735.4-201ENSMUST00000227460 1944 ntBASIC12.71□□□□□ -0.37
Matn3O35701 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Matn3O35701 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Matn3O35701 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Matn3O35701 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Matn3O35701 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Matn3O35701 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Matn3O35701 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Matn3O35701 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC12.71□□□□□ -0.38
Matn3O35701 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Matn3O35701 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Matn3O35701 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC12.71□□□□□ -0.38
Matn3O35701 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Matn3O35701 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Matn3O35701 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Matn3O35701 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Matn3O35701 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Matn3O35701 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Matn3O35701 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Matn3O35701 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Matn3O35701 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Matn3O35701 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Matn3O35701 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Matn3O35701 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Matn3O35701 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Matn3O35701 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Matn3O35701 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Matn3O35701 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Matn3O35701 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC12.7□□□□□ -0.38
Matn3O35701 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Matn3O35701 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Matn3O35701 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Matn3O35701 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Matn3O35701 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC12.7□□□□□ -0.38
Matn3O35701 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC12.7□□□□□ -0.38
Matn3O35701 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Matn3O35701 Gm6944-201ENSMUST00000182449 1006 ntBASIC12.7□□□□□ -0.38
Matn3O35701 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC12.7□□□□□ -0.38
Matn3O35701 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC12.7□□□□□ -0.38
Matn3O35701 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC12.7□□□□□ -0.38
Matn3O35701 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC12.7□□□□□ -0.38
Matn3O35701 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Matn3O35701 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Matn3O35701 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Matn3O35701 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Matn3O35701 Gm5763-201ENSMUST00000155951 1530 ntBASIC12.7□□□□□ -0.38
Matn3O35701 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Matn3O35701 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Matn3O35701 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Matn3O35701 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Matn3O35701 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
Matn3O35701 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Matn3O35701 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
Matn3O35701 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Matn3O35701 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Matn3O35701 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Matn3O35701 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Matn3O35701 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Matn3O35701 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Matn3O35701 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Matn3O35701 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Matn3O35701 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Matn3O35701 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Matn3O35701 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Matn3O35701 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Matn3O35701 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Matn3O35701 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC12.69□□□□□ -0.38
Matn3O35701 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Matn3O35701 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Matn3O35701 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Matn3O35701 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Matn3O35701 Gm11780-201ENSMUST00000136880 516 ntBASIC12.69□□□□□ -0.38
Matn3O35701 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC12.69□□□□□ -0.38
Matn3O35701 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Matn3O35701 AC138767.1-201ENSMUST00000222661 415 ntBASIC12.69□□□□□ -0.38
Matn3O35701 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Matn3O35701 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Matn3O35701 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Matn3O35701 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.69□□□□□ -0.38
Matn3O35701 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Matn3O35701 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Matn3O35701 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Matn3O35701 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Matn3O35701 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms